RNA–Protein interactions for RNA: ENST00000488825.5

KALRN-219, Transcript of kalirin RhoGEF kinase, humanhuman

TSL 1 (best)

Gene KALRN, Length 1,344 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KALRN-219ENST00000488825 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
KALRN-219ENST00000488825 ABCC9O60706 1549 aa25.12■■□□□ 1.61
KALRN-219ENST00000488825 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
KALRN-219ENST00000488825 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
KALRN-219ENST00000488825 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.38
KALRN-219ENST00000488825 NACADO15069 1562 aa23.49■■□□□ 1.35
KALRN-219ENST00000488825 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
KALRN-219ENST00000488825 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
KALRN-219ENST00000488825 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
KALRN-219ENST00000488825 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
KALRN-219ENST00000488825 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.28
KALRN-219ENST00000488825 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
KALRN-219ENST00000488825 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
KALRN-219ENST00000488825 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
KALRN-219ENST00000488825 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
KALRN-219ENST00000488825 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
KALRN-219ENST00000488825 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
KALRN-219ENST00000488825 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.21
KALRN-219ENST00000488825 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
KALRN-219ENST00000488825 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
KALRN-219ENST00000488825 CUX2O14529 1486 aa21.77■■□□□ 1.08
KALRN-219ENST00000488825 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
KALRN-219ENST00000488825 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
KALRN-219ENST00000488825 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
KALRN-219ENST00000488825 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
KALRN-219ENST00000488825 NESP48681 1621 aa21.56■■□□□ 1.04
KALRN-219ENST00000488825 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
KALRN-219ENST00000488825 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
KALRN-219ENST00000488825 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
KALRN-219ENST00000488825 THOC2Q8NI27 1593 aaKnown RBP21.43■■□□□ 1.02
KALRN-219ENST00000488825 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
KALRN-219ENST00000488825 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
KALRN-219ENST00000488825 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
KALRN-219ENST00000488825 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
KALRN-219ENST00000488825 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
KALRN-219ENST00000488825 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
KALRN-219ENST00000488825 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
KALRN-219ENST00000488825 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
KALRN-219ENST00000488825 WDR62O43379 1518 aa21.01■□□□□ 0.95
KALRN-219ENST00000488825 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
KALRN-219ENST00000488825 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
KALRN-219ENST00000488825 WIZO95785 1651 aa20.91■□□□□ 0.94
KALRN-219ENST00000488825 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
KALRN-219ENST00000488825 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
KALRN-219ENST00000488825 CFTRP13569 1480 aa20.76■□□□□ 0.91
KALRN-219ENST00000488825 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
KALRN-219ENST00000488825 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
KALRN-219ENST00000488825 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
KALRN-219ENST00000488825 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
KALRN-219ENST00000488825 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
KALRN-219ENST00000488825 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
KALRN-219ENST00000488825 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
KALRN-219ENST00000488825 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.88
KALRN-219ENST00000488825 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
KALRN-219ENST00000488825 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
KALRN-219ENST00000488825 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
KALRN-219ENST00000488825 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
KALRN-219ENST00000488825 TOPBP1Q92547 1522 aa20.39■□□□□ 0.85
KALRN-219ENST00000488825 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
KALRN-219ENST00000488825 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
KALRN-219ENST00000488825 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
KALRN-219ENST00000488825 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
KALRN-219ENST00000488825 CHD1O14646 1710 aa20.24■□□□□ 0.83
KALRN-219ENST00000488825 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
KALRN-219ENST00000488825 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
KALRN-219ENST00000488825 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
KALRN-219ENST00000488825 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
KALRN-219ENST00000488825 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
KALRN-219ENST00000488825 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
KALRN-219ENST00000488825 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
KALRN-219ENST00000488825 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
KALRN-219ENST00000488825 SOGA1O94964 1423 aa19.97■□□□□ 0.79
KALRN-219ENST00000488825 FBLN2P98095 1184 aa19.96■□□□□ 0.79
KALRN-219ENST00000488825 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
KALRN-219ENST00000488825 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
KALRN-219ENST00000488825 CUX1P39880 1505 aa19.94■□□□□ 0.78
KALRN-219ENST00000488825 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
KALRN-219ENST00000488825 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
KALRN-219ENST00000488825 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
KALRN-219ENST00000488825 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
KALRN-219ENST00000488825 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
KALRN-219ENST00000488825 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
KALRN-219ENST00000488825 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
KALRN-219ENST00000488825 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
KALRN-219ENST00000488825 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
KALRN-219ENST00000488825 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
KALRN-219ENST00000488825 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.75
KALRN-219ENST00000488825 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
KALRN-219ENST00000488825 NUP160Q12769 1436 aa19.65■□□□□ 0.74
KALRN-219ENST00000488825 CEP170Q5SW79 1584 aa19.65■□□□□ 0.74
KALRN-219ENST00000488825 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
KALRN-219ENST00000488825 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
KALRN-219ENST00000488825 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
KALRN-219ENST00000488825 KIF13AQ9H1H9 1805 aa19.54■□□□□ 0.72
KALRN-219ENST00000488825 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
KALRN-219ENST00000488825 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
KALRN-219ENST00000488825 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
KALRN-219ENST00000488825 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
KALRN-219ENST00000488825 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
KALRN-219ENST00000488825 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms