RNA–Protein interactions for RNA: ENST00000488399.5

PDE11A-209, Transcript of phosphodiesterase 11A, humanhuman

TSL 4

Gene PDE11A, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE11A-209ENST00000488399 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
PDE11A-209ENST00000488399 ABCC9O60706 1549 aa15.97■□□□□ 0.15
PDE11A-209ENST00000488399 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
PDE11A-209ENST00000488399 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
PDE11A-209ENST00000488399 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
PDE11A-209ENST00000488399 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
PDE11A-209ENST00000488399 NACADO15069 1562 aa15.04■□□□□ -0
PDE11A-209ENST00000488399 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
PDE11A-209ENST00000488399 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
PDE11A-209ENST00000488399 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
PDE11A-209ENST00000488399 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDE11A-209ENST00000488399 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
PDE11A-209ENST00000488399 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
PDE11A-209ENST00000488399 CHIC1Q5VXU3 224 aa14.52□□□□□ -0.09
PDE11A-209ENST00000488399 CECR2Q9BXF3 1484 aa14.49□□□□□ -0.09
PDE11A-209ENST00000488399 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
PDE11A-209ENST00000488399 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
PDE11A-209ENST00000488399 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
PDE11A-209ENST00000488399 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
PDE11A-209ENST00000488399 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
PDE11A-209ENST00000488399 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
PDE11A-209ENST00000488399 CUX2O14529 1486 aa14.1□□□□□ -0.15
PDE11A-209ENST00000488399 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
PDE11A-209ENST00000488399 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
PDE11A-209ENST00000488399 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
PDE11A-209ENST00000488399 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
PDE11A-209ENST00000488399 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
PDE11A-209ENST00000488399 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
PDE11A-209ENST00000488399 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
PDE11A-209ENST00000488399 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
PDE11A-209ENST00000488399 NESP48681 1621 aa13.63□□□□□ -0.23
PDE11A-209ENST00000488399 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
PDE11A-209ENST00000488399 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
PDE11A-209ENST00000488399 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
PDE11A-209ENST00000488399 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
PDE11A-209ENST00000488399 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
PDE11A-209ENST00000488399 WDR62O43379 1518 aa13.44□□□□□ -0.26
PDE11A-209ENST00000488399 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
PDE11A-209ENST00000488399 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
PDE11A-209ENST00000488399 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
PDE11A-209ENST00000488399 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
PDE11A-209ENST00000488399 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
PDE11A-209ENST00000488399 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
PDE11A-209ENST00000488399 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
PDE11A-209ENST00000488399 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
PDE11A-209ENST00000488399 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
PDE11A-209ENST00000488399 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
PDE11A-209ENST00000488399 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
PDE11A-209ENST00000488399 WIZO95785 1651 aa13.15□□□□□ -0.3
PDE11A-209ENST00000488399 CFTRP13569 1480 aa13.15□□□□□ -0.3
PDE11A-209ENST00000488399 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
PDE11A-209ENST00000488399 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
PDE11A-209ENST00000488399 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
PDE11A-209ENST00000488399 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
PDE11A-209ENST00000488399 CHD1O14646 1710 aa12.99□□□□□ -0.33
PDE11A-209ENST00000488399 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PDE11A-209ENST00000488399 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
PDE11A-209ENST00000488399 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.33
PDE11A-209ENST00000488399 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
PDE11A-209ENST00000488399 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
PDE11A-209ENST00000488399 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
PDE11A-209ENST00000488399 ABCC8Q09428 1581 aa12.93□□□□□ -0.34
PDE11A-209ENST00000488399 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
PDE11A-209ENST00000488399 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
PDE11A-209ENST00000488399 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
PDE11A-209ENST00000488399 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
PDE11A-209ENST00000488399 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
PDE11A-209ENST00000488399 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
PDE11A-209ENST00000488399 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
PDE11A-209ENST00000488399 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
PDE11A-209ENST00000488399 AQRO60306 1485 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDE11A-209ENST00000488399 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
PDE11A-209ENST00000488399 POLA1P09884 1462 aaPredicted RBP12.74□□□□□ -0.37
PDE11A-209ENST00000488399 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
PDE11A-209ENST00000488399 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
PDE11A-209ENST00000488399 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
PDE11A-209ENST00000488399 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
PDE11A-209ENST00000488399 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
PDE11A-209ENST00000488399 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
PDE11A-209ENST00000488399 SOGA1O94964 1423 aa12.62□□□□□ -0.39
PDE11A-209ENST00000488399 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
PDE11A-209ENST00000488399 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
PDE11A-209ENST00000488399 FBLN2P98095 1184 aa12.6□□□□□ -0.39
PDE11A-209ENST00000488399 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
PDE11A-209ENST00000488399 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
PDE11A-209ENST00000488399 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
PDE11A-209ENST00000488399 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
PDE11A-209ENST00000488399 CUX1P39880 1505 aa12.54□□□□□ -0.4
PDE11A-209ENST00000488399 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
PDE11A-209ENST00000488399 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
PDE11A-209ENST00000488399 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
PDE11A-209ENST00000488399 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
PDE11A-209ENST00000488399 NUP160Q12769 1436 aa12.46□□□□□ -0.41
PDE11A-209ENST00000488399 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
PDE11A-209ENST00000488399 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
PDE11A-209ENST00000488399 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
PDE11A-209ENST00000488399 ABCC10Q5T3U5 1492 aa12.37□□□□□ -0.43
PDE11A-209ENST00000488399 DIP2BQ9P265 1576 aa12.37□□□□□ -0.43
PDE11A-209ENST00000488399 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
PDE11A-209ENST00000488399 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms