RNA–Protein interactions for RNA: ENST00000487854.1

COL22A1-205, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 5

Gene COL22A1, Length 697 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-205ENST00000487854 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
COL22A1-205ENST00000487854 ABCC9O60706 1549 aa21.41■■□□□ 1.02
COL22A1-205ENST00000487854 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
COL22A1-205ENST00000487854 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
COL22A1-205ENST00000487854 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
COL22A1-205ENST00000487854 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
COL22A1-205ENST00000487854 NACADO15069 1562 aa20.17■□□□□ 0.82
COL22A1-205ENST00000487854 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
COL22A1-205ENST00000487854 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
COL22A1-205ENST00000487854 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL22A1-205ENST00000487854 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
COL22A1-205ENST00000487854 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
COL22A1-205ENST00000487854 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
COL22A1-205ENST00000487854 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
COL22A1-205ENST00000487854 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
COL22A1-205ENST00000487854 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
COL22A1-205ENST00000487854 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
COL22A1-205ENST00000487854 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
COL22A1-205ENST00000487854 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
COL22A1-205ENST00000487854 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
COL22A1-205ENST00000487854 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
COL22A1-205ENST00000487854 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
COL22A1-205ENST00000487854 CUX2O14529 1486 aa18.58■□□□□ 0.57
COL22A1-205ENST00000487854 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
COL22A1-205ENST00000487854 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
COL22A1-205ENST00000487854 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
COL22A1-205ENST00000487854 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
COL22A1-205ENST00000487854 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
COL22A1-205ENST00000487854 NESP48681 1621 aa18.36■□□□□ 0.53
COL22A1-205ENST00000487854 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
COL22A1-205ENST00000487854 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
COL22A1-205ENST00000487854 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
COL22A1-205ENST00000487854 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
COL22A1-205ENST00000487854 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
COL22A1-205ENST00000487854 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
COL22A1-205ENST00000487854 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
COL22A1-205ENST00000487854 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
COL22A1-205ENST00000487854 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
COL22A1-205ENST00000487854 WDR62O43379 1518 aa17.98■□□□□ 0.47
COL22A1-205ENST00000487854 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
COL22A1-205ENST00000487854 WIZO95785 1651 aa17.96■□□□□ 0.47
COL22A1-205ENST00000487854 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
COL22A1-205ENST00000487854 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
COL22A1-205ENST00000487854 CFTRP13569 1480 aa17.78■□□□□ 0.44
COL22A1-205ENST00000487854 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
COL22A1-205ENST00000487854 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
COL22A1-205ENST00000487854 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
COL22A1-205ENST00000487854 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
COL22A1-205ENST00000487854 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
COL22A1-205ENST00000487854 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
COL22A1-205ENST00000487854 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
COL22A1-205ENST00000487854 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
COL22A1-205ENST00000487854 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
COL22A1-205ENST00000487854 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
COL22A1-205ENST00000487854 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
COL22A1-205ENST00000487854 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
COL22A1-205ENST00000487854 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
COL22A1-205ENST00000487854 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
COL22A1-205ENST00000487854 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
COL22A1-205ENST00000487854 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
COL22A1-205ENST00000487854 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
COL22A1-205ENST00000487854 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
COL22A1-205ENST00000487854 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
COL22A1-205ENST00000487854 CHD1O14646 1710 aa17.35■□□□□ 0.37
COL22A1-205ENST00000487854 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
COL22A1-205ENST00000487854 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL22A1-205ENST00000487854 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
COL22A1-205ENST00000487854 ARAP1Q96P48 1450 aa17.23■□□□□ 0.35
COL22A1-205ENST00000487854 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
COL22A1-205ENST00000487854 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
COL22A1-205ENST00000487854 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
COL22A1-205ENST00000487854 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
COL22A1-205ENST00000487854 SOGA1O94964 1423 aa17.13■□□□□ 0.33
COL22A1-205ENST00000487854 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
COL22A1-205ENST00000487854 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
COL22A1-205ENST00000487854 FBLN2P98095 1184 aa17.11■□□□□ 0.33
COL22A1-205ENST00000487854 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
COL22A1-205ENST00000487854 CUX1P39880 1505 aa17.1■□□□□ 0.33
COL22A1-205ENST00000487854 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
COL22A1-205ENST00000487854 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
COL22A1-205ENST00000487854 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
COL22A1-205ENST00000487854 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
COL22A1-205ENST00000487854 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
COL22A1-205ENST00000487854 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
COL22A1-205ENST00000487854 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
COL22A1-205ENST00000487854 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
COL22A1-205ENST00000487854 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
COL22A1-205ENST00000487854 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
COL22A1-205ENST00000487854 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
COL22A1-205ENST00000487854 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
COL22A1-205ENST00000487854 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
COL22A1-205ENST00000487854 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
COL22A1-205ENST00000487854 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
COL22A1-205ENST00000487854 NUP160Q12769 1436 aa16.8■□□□□ 0.28
COL22A1-205ENST00000487854 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
COL22A1-205ENST00000487854 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
COL22A1-205ENST00000487854 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
COL22A1-205ENST00000487854 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
COL22A1-205ENST00000487854 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
COL22A1-205ENST00000487854 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms