RNA–Protein interactions for RNA: ENST00000486971.1

C3orf38-204, Transcript of chromosome 3 open reading frame 38, humanhuman

TSL 2 BASIC

Gene C3orf38, Length 1,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-204ENST00000486971 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
C3orf38-204ENST00000486971 ABCC9O60706 1549 aa31.2■■■□□ 2.59
C3orf38-204ENST00000486971 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.41
C3orf38-204ENST00000486971 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
C3orf38-204ENST00000486971 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
C3orf38-204ENST00000486971 RB1CC1Q8TDY2 1594 aa29.23■■■□□ 2.27
C3orf38-204ENST00000486971 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
C3orf38-204ENST00000486971 NACADO15069 1562 aa28.71■■■□□ 2.19
C3orf38-204ENST00000486971 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
C3orf38-204ENST00000486971 DNAJC5Q9H3Z4 198 aa28.59■■■□□ 2.17
C3orf38-204ENST00000486971 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
C3orf38-204ENST00000486971 DCAF8L2P0C7V8 631 aa28.29■■■□□ 2.12
C3orf38-204ENST00000486971 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
C3orf38-204ENST00000486971 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
C3orf38-204ENST00000486971 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
C3orf38-204ENST00000486971 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
C3orf38-204ENST00000486971 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
C3orf38-204ENST00000486971 CUX2O14529 1486 aa27.4■■□□□ 1.98
C3orf38-204ENST00000486971 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
C3orf38-204ENST00000486971 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
C3orf38-204ENST00000486971 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
C3orf38-204ENST00000486971 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
C3orf38-204ENST00000486971 ZCCHC6Q5VYS8 1495 aaKnown RBP27.02■■□□□ 1.92
C3orf38-204ENST00000486971 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
C3orf38-204ENST00000486971 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
C3orf38-204ENST00000486971 NESP48681 1621 aa26.44■■□□□ 1.82
C3orf38-204ENST00000486971 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
C3orf38-204ENST00000486971 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
C3orf38-204ENST00000486971 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
C3orf38-204ENST00000486971 ATAD2BQ9ULI0 1458 aa26.22■■□□□ 1.79
C3orf38-204ENST00000486971 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
C3orf38-204ENST00000486971 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
C3orf38-204ENST00000486971 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
C3orf38-204ENST00000486971 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
C3orf38-204ENST00000486971 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
C3orf38-204ENST00000486971 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
C3orf38-204ENST00000486971 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
C3orf38-204ENST00000486971 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
C3orf38-204ENST00000486971 WDR62O43379 1518 aa25.83■■□□□ 1.72
C3orf38-204ENST00000486971 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
C3orf38-204ENST00000486971 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
C3orf38-204ENST00000486971 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
C3orf38-204ENST00000486971 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
C3orf38-204ENST00000486971 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
C3orf38-204ENST00000486971 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
C3orf38-204ENST00000486971 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
C3orf38-204ENST00000486971 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
C3orf38-204ENST00000486971 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
C3orf38-204ENST00000486971 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
C3orf38-204ENST00000486971 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
C3orf38-204ENST00000486971 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
C3orf38-204ENST00000486971 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
C3orf38-204ENST00000486971 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
C3orf38-204ENST00000486971 CFTRP13569 1480 aa25.06■■□□□ 1.6
C3orf38-204ENST00000486971 CHD1O14646 1710 aa25.05■■□□□ 1.6
C3orf38-204ENST00000486971 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
C3orf38-204ENST00000486971 WIZO95785 1651 aa25.02■■□□□ 1.6
C3orf38-204ENST00000486971 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
C3orf38-204ENST00000486971 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
C3orf38-204ENST00000486971 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
C3orf38-204ENST00000486971 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
C3orf38-204ENST00000486971 FBLN2P98095 1184 aa24.83■■□□□ 1.57
C3orf38-204ENST00000486971 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
C3orf38-204ENST00000486971 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.54
C3orf38-204ENST00000486971 ILDR1Q86SU0 546 aaPredicted RBP24.68■■□□□ 1.54
C3orf38-204ENST00000486971 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
C3orf38-204ENST00000486971 CLASP1Q7Z460 1538 aa24.63■■□□□ 1.53
C3orf38-204ENST00000486971 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
C3orf38-204ENST00000486971 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
C3orf38-204ENST00000486971 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
C3orf38-204ENST00000486971 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
C3orf38-204ENST00000486971 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
C3orf38-204ENST00000486971 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
C3orf38-204ENST00000486971 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
C3orf38-204ENST00000486971 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
C3orf38-204ENST00000486971 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
C3orf38-204ENST00000486971 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
C3orf38-204ENST00000486971 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
C3orf38-204ENST00000486971 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
C3orf38-204ENST00000486971 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
C3orf38-204ENST00000486971 KIF13AQ9H1H9 1805 aa24.31■■□□□ 1.48
C3orf38-204ENST00000486971 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
C3orf38-204ENST00000486971 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
C3orf38-204ENST00000486971 SOGA1O94964 1423 aa24.26■■□□□ 1.47
C3orf38-204ENST00000486971 GRIN2BQ13224 1484 aa24.21■■□□□ 1.47
C3orf38-204ENST00000486971 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
C3orf38-204ENST00000486971 KDM4FA0A1W2PPD8 638 aa24.16■■□□□ 1.46
C3orf38-204ENST00000486971 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
C3orf38-204ENST00000486971 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
C3orf38-204ENST00000486971 KDM6BO15054 1643 aa24.06■■□□□ 1.44
C3orf38-204ENST00000486971 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
C3orf38-204ENST00000486971 FAM69CQ0P6D2 419 aa23.97■■□□□ 1.43
C3orf38-204ENST00000486971 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
C3orf38-204ENST00000486971 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
C3orf38-204ENST00000486971 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
C3orf38-204ENST00000486971 DIP2BQ9P265 1576 aa23.91■■□□□ 1.42
C3orf38-204ENST00000486971 HECW2Q9P2P5 1572 aa23.91■■□□□ 1.42
C3orf38-204ENST00000486971 TSPOAP1O95153 1857 aa23.9■■□□□ 1.42
C3orf38-204ENST00000486971 CUX1P39880 1505 aa23.88■■□□□ 1.41
C3orf38-204ENST00000486971 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms