RNA–Protein interactions for RNA: ENST00000485919.5

PHF11-211, Transcript of PHD finger protein 11, humanhuman

TSL 4

Gene PHF11, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-211ENST00000485919 NISCHQ9Y2I1 1504 aa20.79■□□□□ 0.92
PHF11-211ENST00000485919 ABCC9O60706 1549 aa18.93■□□□□ 0.62
PHF11-211ENST00000485919 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
PHF11-211ENST00000485919 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
PHF11-211ENST00000485919 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
PHF11-211ENST00000485919 NACADO15069 1562 aa17.78■□□□□ 0.44
PHF11-211ENST00000485919 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
PHF11-211ENST00000485919 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
PHF11-211ENST00000485919 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHF11-211ENST00000485919 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
PHF11-211ENST00000485919 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
PHF11-211ENST00000485919 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
PHF11-211ENST00000485919 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
PHF11-211ENST00000485919 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
PHF11-211ENST00000485919 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
PHF11-211ENST00000485919 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
PHF11-211ENST00000485919 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
PHF11-211ENST00000485919 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
PHF11-211ENST00000485919 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
PHF11-211ENST00000485919 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
PHF11-211ENST00000485919 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
PHF11-211ENST00000485919 CUX2O14529 1486 aa16.4■□□□□ 0.22
PHF11-211ENST00000485919 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
PHF11-211ENST00000485919 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
PHF11-211ENST00000485919 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
PHF11-211ENST00000485919 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
PHF11-211ENST00000485919 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
PHF11-211ENST00000485919 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
PHF11-211ENST00000485919 NESP48681 1621 aa16.19■□□□□ 0.18
PHF11-211ENST00000485919 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
PHF11-211ENST00000485919 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
PHF11-211ENST00000485919 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
PHF11-211ENST00000485919 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
PHF11-211ENST00000485919 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
PHF11-211ENST00000485919 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
PHF11-211ENST00000485919 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
PHF11-211ENST00000485919 PDS5BQ9NTI5 1447 aa15.99■□□□□ 0.15
PHF11-211ENST00000485919 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
PHF11-211ENST00000485919 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
PHF11-211ENST00000485919 WDR62O43379 1518 aa15.83■□□□□ 0.12
PHF11-211ENST00000485919 WIZO95785 1651 aa15.83■□□□□ 0.12
PHF11-211ENST00000485919 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
PHF11-211ENST00000485919 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
PHF11-211ENST00000485919 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
PHF11-211ENST00000485919 CFTRP13569 1480 aa15.66■□□□□ 0.1
PHF11-211ENST00000485919 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
PHF11-211ENST00000485919 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
PHF11-211ENST00000485919 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
PHF11-211ENST00000485919 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
PHF11-211ENST00000485919 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
PHF11-211ENST00000485919 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
PHF11-211ENST00000485919 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
PHF11-211ENST00000485919 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
PHF11-211ENST00000485919 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
PHF11-211ENST00000485919 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
PHF11-211ENST00000485919 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
PHF11-211ENST00000485919 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
PHF11-211ENST00000485919 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
PHF11-211ENST00000485919 ARHGEF11O15085 1522 aa15.37■□□□□ 0.05
PHF11-211ENST00000485919 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
PHF11-211ENST00000485919 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
PHF11-211ENST00000485919 CHD1O14646 1710 aa15.28■□□□□ 0.04
PHF11-211ENST00000485919 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
PHF11-211ENST00000485919 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
PHF11-211ENST00000485919 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
PHF11-211ENST00000485919 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
PHF11-211ENST00000485919 FBLN2P98095 1184 aa15.23■□□□□ 0.03
PHF11-211ENST00000485919 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
PHF11-211ENST00000485919 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
PHF11-211ENST00000485919 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
PHF11-211ENST00000485919 SOGA1O94964 1423 aa15.17■□□□□ 0.02
PHF11-211ENST00000485919 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
PHF11-211ENST00000485919 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
PHF11-211ENST00000485919 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
PHF11-211ENST00000485919 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
PHF11-211ENST00000485919 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
PHF11-211ENST00000485919 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
PHF11-211ENST00000485919 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
PHF11-211ENST00000485919 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
PHF11-211ENST00000485919 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
PHF11-211ENST00000485919 CUX1P39880 1505 aa15.07■□□□□ 0
PHF11-211ENST00000485919 GRIN2BQ13224 1484 aa15.06■□□□□ 0
PHF11-211ENST00000485919 SYNJ2O15056 1496 aa15.03■□□□□ -0
PHF11-211ENST00000485919 PBRM1Q86U86 1689 aa15□□□□□ -0.01
PHF11-211ENST00000485919 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
PHF11-211ENST00000485919 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
PHF11-211ENST00000485919 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
PHF11-211ENST00000485919 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
PHF11-211ENST00000485919 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
PHF11-211ENST00000485919 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
PHF11-211ENST00000485919 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
PHF11-211ENST00000485919 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
PHF11-211ENST00000485919 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
PHF11-211ENST00000485919 SUPT5HO00267 1087 aaKnown RBP14.8□□□□□ -0.04
PHF11-211ENST00000485919 NUP160Q12769 1436 aa14.8□□□□□ -0.04
PHF11-211ENST00000485919 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
PHF11-211ENST00000485919 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
PHF11-211ENST00000485919 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
PHF11-211ENST00000485919 SHROOM2Q13796 1616 aa14.77□□□□□ -0.05
PHF11-211ENST00000485919 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms