RNA–Protein interactions for RNA: ENST00000484715.1

GTF2E1-203, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-203ENST00000484715 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
GTF2E1-203ENST00000484715 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
GTF2E1-203ENST00000484715 ABCC9O60706 1549 aa24.77■■□□□ 1.56
GTF2E1-203ENST00000484715 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
GTF2E1-203ENST00000484715 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
GTF2E1-203ENST00000484715 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
GTF2E1-203ENST00000484715 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
GTF2E1-203ENST00000484715 NACADO15069 1562 aa23.34■■□□□ 1.33
GTF2E1-203ENST00000484715 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
GTF2E1-203ENST00000484715 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
GTF2E1-203ENST00000484715 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
GTF2E1-203ENST00000484715 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
GTF2E1-203ENST00000484715 BICRAQ9NZM4 1560 aa22.83■■□□□ 1.25
GTF2E1-203ENST00000484715 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
GTF2E1-203ENST00000484715 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
GTF2E1-203ENST00000484715 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
GTF2E1-203ENST00000484715 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
GTF2E1-203ENST00000484715 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
GTF2E1-203ENST00000484715 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
GTF2E1-203ENST00000484715 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
GTF2E1-203ENST00000484715 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
GTF2E1-203ENST00000484715 CUX2O14529 1486 aa21.59■■□□□ 1.05
GTF2E1-203ENST00000484715 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
GTF2E1-203ENST00000484715 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
GTF2E1-203ENST00000484715 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
GTF2E1-203ENST00000484715 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
GTF2E1-203ENST00000484715 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
GTF2E1-203ENST00000484715 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
GTF2E1-203ENST00000484715 SMARCA4P51532 1647 aa21.33■■□□□ 1
GTF2E1-203ENST00000484715 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
GTF2E1-203ENST00000484715 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
GTF2E1-203ENST00000484715 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
GTF2E1-203ENST00000484715 NESP48681 1621 aa21.18■□□□□ 0.98
GTF2E1-203ENST00000484715 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
GTF2E1-203ENST00000484715 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
GTF2E1-203ENST00000484715 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
GTF2E1-203ENST00000484715 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
GTF2E1-203ENST00000484715 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
GTF2E1-203ENST00000484715 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
GTF2E1-203ENST00000484715 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
GTF2E1-203ENST00000484715 WDR62O43379 1518 aa20.8■□□□□ 0.92
GTF2E1-203ENST00000484715 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
GTF2E1-203ENST00000484715 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
GTF2E1-203ENST00000484715 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
GTF2E1-203ENST00000484715 WIZO95785 1651 aa20.67■□□□□ 0.9
GTF2E1-203ENST00000484715 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
GTF2E1-203ENST00000484715 CFTRP13569 1480 aa20.53■□□□□ 0.88
GTF2E1-203ENST00000484715 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
GTF2E1-203ENST00000484715 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
GTF2E1-203ENST00000484715 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
GTF2E1-203ENST00000484715 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
GTF2E1-203ENST00000484715 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
GTF2E1-203ENST00000484715 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
GTF2E1-203ENST00000484715 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
GTF2E1-203ENST00000484715 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
GTF2E1-203ENST00000484715 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
GTF2E1-203ENST00000484715 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
GTF2E1-203ENST00000484715 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
GTF2E1-203ENST00000484715 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
GTF2E1-203ENST00000484715 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
GTF2E1-203ENST00000484715 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
GTF2E1-203ENST00000484715 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
GTF2E1-203ENST00000484715 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
GTF2E1-203ENST00000484715 CHD1O14646 1710 aa20.06■□□□□ 0.8
GTF2E1-203ENST00000484715 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
GTF2E1-203ENST00000484715 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
GTF2E1-203ENST00000484715 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
GTF2E1-203ENST00000484715 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.78
GTF2E1-203ENST00000484715 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
GTF2E1-203ENST00000484715 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
GTF2E1-203ENST00000484715 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
GTF2E1-203ENST00000484715 FBLN2P98095 1184 aa19.82■□□□□ 0.76
GTF2E1-203ENST00000484715 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
GTF2E1-203ENST00000484715 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
GTF2E1-203ENST00000484715 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
GTF2E1-203ENST00000484715 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
GTF2E1-203ENST00000484715 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
GTF2E1-203ENST00000484715 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
GTF2E1-203ENST00000484715 SOGA1O94964 1423 aa19.79■□□□□ 0.76
GTF2E1-203ENST00000484715 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
GTF2E1-203ENST00000484715 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
GTF2E1-203ENST00000484715 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
GTF2E1-203ENST00000484715 SYNJ2O15056 1496 aa19.7■□□□□ 0.74
GTF2E1-203ENST00000484715 CUX1P39880 1505 aa19.7■□□□□ 0.74
GTF2E1-203ENST00000484715 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
GTF2E1-203ENST00000484715 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
GTF2E1-203ENST00000484715 FOXD1Q16676 465 aa19.66■□□□□ 0.74
GTF2E1-203ENST00000484715 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
GTF2E1-203ENST00000484715 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
GTF2E1-203ENST00000484715 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
GTF2E1-203ENST00000484715 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
GTF2E1-203ENST00000484715 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
GTF2E1-203ENST00000484715 NUP160Q12769 1436 aa19.42■□□□□ 0.7
GTF2E1-203ENST00000484715 CEP170Q5SW79 1584 aa19.41■□□□□ 0.7
GTF2E1-203ENST00000484715 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
GTF2E1-203ENST00000484715 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
GTF2E1-203ENST00000484715 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
GTF2E1-203ENST00000484715 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
GTF2E1-203ENST00000484715 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
GTF2E1-203ENST00000484715 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms