RNA–Protein interactions for RNA: ENST00000484346.1

PODXL-206, Transcript of podocalyxin like, humanhuman

TSL 2

Gene PODXL, Length 797 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-206ENST00000484346 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
PODXL-206ENST00000484346 ABCC9O60706 1549 aa26.78■■□□□ 1.88
PODXL-206ENST00000484346 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
PODXL-206ENST00000484346 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
PODXL-206ENST00000484346 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
PODXL-206ENST00000484346 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
PODXL-206ENST00000484346 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
PODXL-206ENST00000484346 NACADO15069 1562 aa25.1■■□□□ 1.61
PODXL-206ENST00000484346 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
PODXL-206ENST00000484346 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
PODXL-206ENST00000484346 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
PODXL-206ENST00000484346 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
PODXL-206ENST00000484346 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
PODXL-206ENST00000484346 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PODXL-206ENST00000484346 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
PODXL-206ENST00000484346 CECR2Q9BXF3 1484 aa24.23■■□□□ 1.47
PODXL-206ENST00000484346 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PODXL-206ENST00000484346 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
PODXL-206ENST00000484346 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
PODXL-206ENST00000484346 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
PODXL-206ENST00000484346 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
PODXL-206ENST00000484346 CUX2O14529 1486 aa23.43■■□□□ 1.34
PODXL-206ENST00000484346 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
PODXL-206ENST00000484346 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
PODXL-206ENST00000484346 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
PODXL-206ENST00000484346 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
PODXL-206ENST00000484346 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
PODXL-206ENST00000484346 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
PODXL-206ENST00000484346 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
PODXL-206ENST00000484346 NESP48681 1621 aa22.86■■□□□ 1.25
PODXL-206ENST00000484346 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
PODXL-206ENST00000484346 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
PODXL-206ENST00000484346 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
PODXL-206ENST00000484346 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
PODXL-206ENST00000484346 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
PODXL-206ENST00000484346 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
PODXL-206ENST00000484346 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
PODXL-206ENST00000484346 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PODXL-206ENST00000484346 WDR62O43379 1518 aa22.42■■□□□ 1.18
PODXL-206ENST00000484346 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
PODXL-206ENST00000484346 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
PODXL-206ENST00000484346 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
PODXL-206ENST00000484346 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
PODXL-206ENST00000484346 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
PODXL-206ENST00000484346 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
PODXL-206ENST00000484346 WIZO95785 1651 aa22.11■■□□□ 1.13
PODXL-206ENST00000484346 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
PODXL-206ENST00000484346 RIMBP3CA6NJZ7 1639 aa22.03■■□□□ 1.12
PODXL-206ENST00000484346 RIMBP3BA6NNM3 1639 aa22.03■■□□□ 1.12
PODXL-206ENST00000484346 RIMBP3Q9UFD9 1639 aa22.03■■□□□ 1.12
PODXL-206ENST00000484346 CFTRP13569 1480 aa22.01■■□□□ 1.11
PODXL-206ENST00000484346 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
PODXL-206ENST00000484346 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
PODXL-206ENST00000484346 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
PODXL-206ENST00000484346 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
PODXL-206ENST00000484346 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
PODXL-206ENST00000484346 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
PODXL-206ENST00000484346 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
PODXL-206ENST00000484346 CHD1O14646 1710 aa21.69■■□□□ 1.06
PODXL-206ENST00000484346 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
PODXL-206ENST00000484346 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
PODXL-206ENST00000484346 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
PODXL-206ENST00000484346 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
PODXL-206ENST00000484346 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
PODXL-206ENST00000484346 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
PODXL-206ENST00000484346 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
PODXL-206ENST00000484346 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
PODXL-206ENST00000484346 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
PODXL-206ENST00000484346 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
PODXL-206ENST00000484346 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
PODXL-206ENST00000484346 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
PODXL-206ENST00000484346 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
PODXL-206ENST00000484346 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
PODXL-206ENST00000484346 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1.01
PODXL-206ENST00000484346 FBLN2P98095 1184 aa21.32■■□□□ 1
PODXL-206ENST00000484346 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
PODXL-206ENST00000484346 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
PODXL-206ENST00000484346 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
PODXL-206ENST00000484346 SOGA1O94964 1423 aa21.21■□□□□ 0.99
PODXL-206ENST00000484346 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
PODXL-206ENST00000484346 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
PODXL-206ENST00000484346 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
PODXL-206ENST00000484346 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
PODXL-206ENST00000484346 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
PODXL-206ENST00000484346 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
PODXL-206ENST00000484346 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
PODXL-206ENST00000484346 CUX1P39880 1505 aa21.06■□□□□ 0.96
PODXL-206ENST00000484346 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
PODXL-206ENST00000484346 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
PODXL-206ENST00000484346 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
PODXL-206ENST00000484346 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
PODXL-206ENST00000484346 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
PODXL-206ENST00000484346 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
PODXL-206ENST00000484346 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
PODXL-206ENST00000484346 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
PODXL-206ENST00000484346 NUP160Q12769 1436 aa20.86■□□□□ 0.93
PODXL-206ENST00000484346 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
PODXL-206ENST00000484346 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
PODXL-206ENST00000484346 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
PODXL-206ENST00000484346 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms