RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
COPS6-209ENST00000483891 ABCC9O60706 1549 aa13.7□□□□□ -0.22
COPS6-209ENST00000483891 AEBP2Q6ZN18 517 aaPredicted RBP13.57□□□□□ -0.24
COPS6-209ENST00000483891 CCDC180Q9P1Z9 1646 aa13.36□□□□□ -0.27
COPS6-209ENST00000483891 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
COPS6-209ENST00000483891 CHIC1Q5VXU3 224 aa13.35□□□□□ -0.27
COPS6-209ENST00000483891 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
COPS6-209ENST00000483891 NACADO15069 1562 aa12.73□□□□□ -0.37
COPS6-209ENST00000483891 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
COPS6-209ENST00000483891 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
COPS6-209ENST00000483891 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
COPS6-209ENST00000483891 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
COPS6-209ENST00000483891 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
COPS6-209ENST00000483891 CECR2Q9BXF3 1484 aa12.45□□□□□ -0.42
COPS6-209ENST00000483891 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
COPS6-209ENST00000483891 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
COPS6-209ENST00000483891 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
COPS6-209ENST00000483891 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
COPS6-209ENST00000483891 CUX2O14529 1486 aa12.14□□□□□ -0.47
COPS6-209ENST00000483891 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
COPS6-209ENST00000483891 SCRIBQ14160 1630 aa12□□□□□ -0.49
COPS6-209ENST00000483891 ZCCHC6Q5VYS8 1495 aaKnown RBP11.96□□□□□ -0.49
COPS6-209ENST00000483891 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
COPS6-209ENST00000483891 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
COPS6-209ENST00000483891 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
COPS6-209ENST00000483891 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
COPS6-209ENST00000483891 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
COPS6-209ENST00000483891 NESP48681 1621 aa11.64□□□□□ -0.55
COPS6-209ENST00000483891 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
COPS6-209ENST00000483891 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
COPS6-209ENST00000483891 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
COPS6-209ENST00000483891 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
COPS6-209ENST00000483891 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
COPS6-209ENST00000483891 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
COPS6-209ENST00000483891 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
COPS6-209ENST00000483891 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
COPS6-209ENST00000483891 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
COPS6-209ENST00000483891 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
COPS6-209ENST00000483891 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
COPS6-209ENST00000483891 WDR62O43379 1518 aa11.44□□□□□ -0.58
COPS6-209ENST00000483891 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
COPS6-209ENST00000483891 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
COPS6-209ENST00000483891 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
COPS6-209ENST00000483891 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
COPS6-209ENST00000483891 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
COPS6-209ENST00000483891 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
COPS6-209ENST00000483891 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
COPS6-209ENST00000483891 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
COPS6-209ENST00000483891 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
COPS6-209ENST00000483891 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
COPS6-209ENST00000483891 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
COPS6-209ENST00000483891 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
COPS6-209ENST00000483891 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
COPS6-209ENST00000483891 CFTRP13569 1480 aa11.12□□□□□ -0.63
COPS6-209ENST00000483891 ARAP1Q96P48 1450 aa11.12□□□□□ -0.63
COPS6-209ENST00000483891 RSF1Q96T23 1441 aaPredicted RBP11.08□□□□□ -0.64
COPS6-209ENST00000483891 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
COPS6-209ENST00000483891 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
COPS6-209ENST00000483891 CHD1O14646 1710 aa11.02□□□□□ -0.65
COPS6-209ENST00000483891 PRDM2Q13029 1718 aa11.02□□□□□ -0.65
COPS6-209ENST00000483891 WIZO95785 1651 aa11.01□□□□□ -0.65
COPS6-209ENST00000483891 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
COPS6-209ENST00000483891 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
COPS6-209ENST00000483891 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
COPS6-209ENST00000483891 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
COPS6-209ENST00000483891 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
COPS6-209ENST00000483891 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
COPS6-209ENST00000483891 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.673e-14■■■■■ 70.9
COPS6-209ENST00000483891 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
COPS6-209ENST00000483891 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
COPS6-209ENST00000483891 ILDR1Q86SU0 546 aaPredicted RBP10.86□□□□□ -0.67
COPS6-209ENST00000483891 DNMBPQ6XZF7 1577 aa10.86□□□□□ -0.67
COPS6-209ENST00000483891 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
COPS6-209ENST00000483891 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
COPS6-209ENST00000483891 FBLN2P98095 1184 aa10.82□□□□□ -0.68
COPS6-209ENST00000483891 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
COPS6-209ENST00000483891 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
COPS6-209ENST00000483891 MAGI1Q96QZ7 1491 aaPredicted RBP10.77□□□□□ -0.69
COPS6-209ENST00000483891 KIF13AQ9H1H9 1805 aa10.76□□□□□ -0.69
COPS6-209ENST00000483891 SNAPC4Q5SXM2 1469 aa10.75□□□□□ -0.69
COPS6-209ENST00000483891 CCDC88BA6NC98 1476 aa10.73□□□□□ -0.69
COPS6-209ENST00000483891 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
COPS6-209ENST00000483891 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
COPS6-209ENST00000483891 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
COPS6-209ENST00000483891 SOGA1O94964 1423 aa10.7□□□□□ -0.7
COPS6-209ENST00000483891 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
COPS6-209ENST00000483891 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
COPS6-209ENST00000483891 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
COPS6-209ENST00000483891 FOXD1Q16676 465 aa10.68□□□□□ -0.7
COPS6-209ENST00000483891 ERCC6L2Q5T890 1561 aa10.64□□□□□ -0.71
COPS6-209ENST00000483891 PBRM1Q86U86 1689 aa10.63□□□□□ -0.71
COPS6-209ENST00000483891 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
COPS6-209ENST00000483891 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
COPS6-209ENST00000483891 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
COPS6-209ENST00000483891 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
COPS6-209ENST00000483891 KDM6BO15054 1643 aa10.57□□□□□ -0.72
COPS6-209ENST00000483891 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
COPS6-209ENST00000483891 NUP160Q12769 1436 aa10.57□□□□□ -0.72
COPS6-209ENST00000483891 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
COPS6-209ENST00000483891 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms