RNA–Protein interactions for RNA: ENST00000483254.1

PAPPA-203, Transcript of pappalysin 1, humanhuman

TSL 3

Gene PAPPA, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPPA-203ENST00000483254 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
PAPPA-203ENST00000483254 ABCC9O60706 1549 aa19.48■□□□□ 0.71
PAPPA-203ENST00000483254 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
PAPPA-203ENST00000483254 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
PAPPA-203ENST00000483254 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
PAPPA-203ENST00000483254 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
PAPPA-203ENST00000483254 NACADO15069 1562 aa18.38■□□□□ 0.53
PAPPA-203ENST00000483254 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
PAPPA-203ENST00000483254 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
PAPPA-203ENST00000483254 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
PAPPA-203ENST00000483254 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
PAPPA-203ENST00000483254 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
PAPPA-203ENST00000483254 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
PAPPA-203ENST00000483254 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
PAPPA-203ENST00000483254 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
PAPPA-203ENST00000483254 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
PAPPA-203ENST00000483254 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
PAPPA-203ENST00000483254 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
PAPPA-203ENST00000483254 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.39
PAPPA-203ENST00000483254 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
PAPPA-203ENST00000483254 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
PAPPA-203ENST00000483254 CUX2O14529 1486 aa17.02■□□□□ 0.32
PAPPA-203ENST00000483254 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
PAPPA-203ENST00000483254 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
PAPPA-203ENST00000483254 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
PAPPA-203ENST00000483254 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
PAPPA-203ENST00000483254 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
PAPPA-203ENST00000483254 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
PAPPA-203ENST00000483254 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
PAPPA-203ENST00000483254 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
PAPPA-203ENST00000483254 NESP48681 1621 aa16.63■□□□□ 0.25
PAPPA-203ENST00000483254 PEG3Q9GZU2 1588 aa16.63■□□□□ 0.25
PAPPA-203ENST00000483254 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
PAPPA-203ENST00000483254 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
PAPPA-203ENST00000483254 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
PAPPA-203ENST00000483254 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
PAPPA-203ENST00000483254 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
PAPPA-203ENST00000483254 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
PAPPA-203ENST00000483254 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
PAPPA-203ENST00000483254 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
PAPPA-203ENST00000483254 WDR62O43379 1518 aa16.31■□□□□ 0.2
PAPPA-203ENST00000483254 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
PAPPA-203ENST00000483254 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
PAPPA-203ENST00000483254 CFTRP13569 1480 aa16.22■□□□□ 0.19
PAPPA-203ENST00000483254 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
PAPPA-203ENST00000483254 WIZO95785 1651 aa16.15■□□□□ 0.18
PAPPA-203ENST00000483254 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
PAPPA-203ENST00000483254 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
PAPPA-203ENST00000483254 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
PAPPA-203ENST00000483254 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
PAPPA-203ENST00000483254 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
PAPPA-203ENST00000483254 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
PAPPA-203ENST00000483254 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
PAPPA-203ENST00000483254 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
PAPPA-203ENST00000483254 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
PAPPA-203ENST00000483254 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
PAPPA-203ENST00000483254 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
PAPPA-203ENST00000483254 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
PAPPA-203ENST00000483254 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
PAPPA-203ENST00000483254 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
PAPPA-203ENST00000483254 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
PAPPA-203ENST00000483254 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
PAPPA-203ENST00000483254 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
PAPPA-203ENST00000483254 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
PAPPA-203ENST00000483254 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
PAPPA-203ENST00000483254 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
PAPPA-203ENST00000483254 FBLN2P98095 1184 aa15.72■□□□□ 0.11
PAPPA-203ENST00000483254 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
PAPPA-203ENST00000483254 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
PAPPA-203ENST00000483254 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
PAPPA-203ENST00000483254 SOGA1O94964 1423 aa15.68■□□□□ 0.1
PAPPA-203ENST00000483254 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
PAPPA-203ENST00000483254 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
PAPPA-203ENST00000483254 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
PAPPA-203ENST00000483254 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
PAPPA-203ENST00000483254 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
PAPPA-203ENST00000483254 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
PAPPA-203ENST00000483254 CHD1O14646 1710 aa15.58■□□□□ 0.08
PAPPA-203ENST00000483254 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
PAPPA-203ENST00000483254 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
PAPPA-203ENST00000483254 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
PAPPA-203ENST00000483254 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
PAPPA-203ENST00000483254 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
PAPPA-203ENST00000483254 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
PAPPA-203ENST00000483254 CUX1P39880 1505 aa15.46■□□□□ 0.07
PAPPA-203ENST00000483254 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
PAPPA-203ENST00000483254 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
PAPPA-203ENST00000483254 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
PAPPA-203ENST00000483254 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
PAPPA-203ENST00000483254 NUP160Q12769 1436 aa15.31■□□□□ 0.04
PAPPA-203ENST00000483254 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
PAPPA-203ENST00000483254 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
PAPPA-203ENST00000483254 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
PAPPA-203ENST00000483254 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
PAPPA-203ENST00000483254 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
PAPPA-203ENST00000483254 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
PAPPA-203ENST00000483254 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
PAPPA-203ENST00000483254 NPM1P06748 294 aaKnown RBP eCLIP15.2■□□□□ 0.02
PAPPA-203ENST00000483254 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
PAPPA-203ENST00000483254 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms