RNA–Protein interactions for RNA: ENST00000483234.5

BRD9-205, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,211 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-205ENST00000483234 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
BRD9-205ENST00000483234 CCDC180Q9P1Z9 1646 aa34.8■■■■□ 3.16
BRD9-205ENST00000483234 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
BRD9-205ENST00000483234 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
BRD9-205ENST00000483234 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
BRD9-205ENST00000483234 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
BRD9-205ENST00000483234 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
BRD9-205ENST00000483234 ABCC9O60706 1549 aa32.37■■■□□ 2.77
BRD9-205ENST00000483234 NACADO15069 1562 aa32.3■■■□□ 2.76
BRD9-205ENST00000483234 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
BRD9-205ENST00000483234 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
BRD9-205ENST00000483234 SUPT5HO00267 1087 aaKnown RBP31.7■■■□□ 2.67
BRD9-205ENST00000483234 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.6
BRD9-205ENST00000483234 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
BRD9-205ENST00000483234 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
BRD9-205ENST00000483234 BICRAQ9NZM4 1560 aa30.91■■■□□ 2.54
BRD9-205ENST00000483234 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
BRD9-205ENST00000483234 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
BRD9-205ENST00000483234 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
BRD9-205ENST00000483234 WIZO95785 1651 aa30.66■■■□□ 2.5
BRD9-205ENST00000483234 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
BRD9-205ENST00000483234 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
BRD9-205ENST00000483234 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
BRD9-205ENST00000483234 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
BRD9-205ENST00000483234 SMARCA2P51531 1590 aa30.12■■■□□ 2.41
BRD9-205ENST00000483234 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
BRD9-205ENST00000483234 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
BRD9-205ENST00000483234 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
BRD9-205ENST00000483234 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
BRD9-205ENST00000483234 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
BRD9-205ENST00000483234 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
BRD9-205ENST00000483234 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
BRD9-205ENST00000483234 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
BRD9-205ENST00000483234 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
BRD9-205ENST00000483234 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
BRD9-205ENST00000483234 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
BRD9-205ENST00000483234 CFTRP13569 1480 aa29.22■■■□□ 2.27
BRD9-205ENST00000483234 EEA1Q15075 1411 aa29.2■■■□□ 2.27
BRD9-205ENST00000483234 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.27
BRD9-205ENST00000483234 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
BRD9-205ENST00000483234 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
BRD9-205ENST00000483234 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
BRD9-205ENST00000483234 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
BRD9-205ENST00000483234 SOGA1O94964 1423 aa29.04■■■□□ 2.24
BRD9-205ENST00000483234 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
BRD9-205ENST00000483234 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
BRD9-205ENST00000483234 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
BRD9-205ENST00000483234 CUX1P39880 1505 aa28.88■■■□□ 2.21
BRD9-205ENST00000483234 KIF21BO75037 1637 aa28.78■■■□□ 2.2
BRD9-205ENST00000483234 GOLGA3Q08378 1498 aa28.75■■■□□ 2.19
BRD9-205ENST00000483234 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
BRD9-205ENST00000483234 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
BRD9-205ENST00000483234 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
BRD9-205ENST00000483234 EHMT2Q96KQ7 1210 aa28.68■■■□□ 2.18
BRD9-205ENST00000483234 FANCD2Q9BXW9 1451 aa28.68■■■□□ 2.18
BRD9-205ENST00000483234 CEP162Q5TB80 1403 aa28.58■■■□□ 2.17
BRD9-205ENST00000483234 HRCP23327 699 aa28.58■■■□□ 2.17
BRD9-205ENST00000483234 KIF27Q86VH2 1401 aa28.57■■■□□ 2.16
BRD9-205ENST00000483234 NESP48681 1621 aa28.55■■■□□ 2.16
BRD9-205ENST00000483234 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
BRD9-205ENST00000483234 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
BRD9-205ENST00000483234 PRXQ9BXM0 1461 aa28.5■■■□□ 2.15
BRD9-205ENST00000483234 UBTFP17480 764 aaKnown RBP28.5■■■□□ 2.15
BRD9-205ENST00000483234 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
BRD9-205ENST00000483234 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
BRD9-205ENST00000483234 PCGF6Q9BYE7 350 aa28.47■■■□□ 2.15
BRD9-205ENST00000483234 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
BRD9-205ENST00000483234 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.15
BRD9-205ENST00000483234 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
BRD9-205ENST00000483234 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
BRD9-205ENST00000483234 CUX2O14529 1486 aa28.36■■■□□ 2.13
BRD9-205ENST00000483234 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
BRD9-205ENST00000483234 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
BRD9-205ENST00000483234 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
BRD9-205ENST00000483234 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
BRD9-205ENST00000483234 CLIP1P30622 1438 aa28.27■■■□□ 2.12
BRD9-205ENST00000483234 IGF1RP08069 1367 aa28.26■■■□□ 2.11
BRD9-205ENST00000483234 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
BRD9-205ENST00000483234 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
BRD9-205ENST00000483234 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
BRD9-205ENST00000483234 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
BRD9-205ENST00000483234 CUL7Q14999 1698 aa28.08■■■□□ 2.09
BRD9-205ENST00000483234 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
BRD9-205ENST00000483234 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
BRD9-205ENST00000483234 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
BRD9-205ENST00000483234 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
BRD9-205ENST00000483234 WDR62O43379 1518 aa27.92■■■□□ 2.06
BRD9-205ENST00000483234 GAPVD1Q14C86 1478 aa27.92■■■□□ 2.06
BRD9-205ENST00000483234 PPARGC1BQ86YN6 1023 aaKnown RBP27.9■■■□□ 2.06
BRD9-205ENST00000483234 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
BRD9-205ENST00000483234 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
BRD9-205ENST00000483234 CTTNBP2Q8WZ74 1663 aa27.8■■■□□ 2.04
BRD9-205ENST00000483234 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
BRD9-205ENST00000483234 RANGAP1P46060 587 aaPredicted RBP27.79■■■□□ 2.04
BRD9-205ENST00000483234 APLP2Q06481 763 aa27.77■■■□□ 2.04
BRD9-205ENST00000483234 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
BRD9-205ENST00000483234 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
BRD9-205ENST00000483234 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
BRD9-205ENST00000483234 EFCAB5A4FU69 1503 aa27.73■■■□□ 2.03
BRD9-205ENST00000483234 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms