RNA–Protein interactions for RNA: ENST00000480001.5

RARB-207, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-207ENST00000480001 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
RARB-207ENST00000480001 ABCC9O60706 1549 aa18.66■□□□□ 0.58
RARB-207ENST00000480001 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
RARB-207ENST00000480001 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
RARB-207ENST00000480001 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
RARB-207ENST00000480001 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
RARB-207ENST00000480001 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
RARB-207ENST00000480001 NACADO15069 1562 aa17.28■□□□□ 0.36
RARB-207ENST00000480001 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
RARB-207ENST00000480001 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
RARB-207ENST00000480001 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
RARB-207ENST00000480001 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
RARB-207ENST00000480001 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
RARB-207ENST00000480001 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
RARB-207ENST00000480001 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
RARB-207ENST00000480001 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
RARB-207ENST00000480001 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
RARB-207ENST00000480001 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
RARB-207ENST00000480001 CUX2O14529 1486 aa16.48■□□□□ 0.23
RARB-207ENST00000480001 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
RARB-207ENST00000480001 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
RARB-207ENST00000480001 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
RARB-207ENST00000480001 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
RARB-207ENST00000480001 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
RARB-207ENST00000480001 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
RARB-207ENST00000480001 NESP48681 1621 aa15.8■□□□□ 0.12
RARB-207ENST00000480001 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
RARB-207ENST00000480001 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
RARB-207ENST00000480001 HMGXB3Q12766 1538 aa15.75■□□□□ 0.11
RARB-207ENST00000480001 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
RARB-207ENST00000480001 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
RARB-207ENST00000480001 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
RARB-207ENST00000480001 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
RARB-207ENST00000480001 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
RARB-207ENST00000480001 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
RARB-207ENST00000480001 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
RARB-207ENST00000480001 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
RARB-207ENST00000480001 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
RARB-207ENST00000480001 WDR62O43379 1518 aa15.48■□□□□ 0.07
RARB-207ENST00000480001 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
RARB-207ENST00000480001 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
RARB-207ENST00000480001 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
RARB-207ENST00000480001 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
RARB-207ENST00000480001 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
RARB-207ENST00000480001 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
RARB-207ENST00000480001 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
RARB-207ENST00000480001 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
RARB-207ENST00000480001 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
RARB-207ENST00000480001 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
RARB-207ENST00000480001 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
RARB-207ENST00000480001 CFTRP13569 1480 aa15.11■□□□□ 0.01
RARB-207ENST00000480001 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
RARB-207ENST00000480001 ARAP1Q96P48 1450 aa15.08■□□□□ 0
RARB-207ENST00000480001 IFT140Q96RY7 1462 aa15.08■□□□□ 0
RARB-207ENST00000480001 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
RARB-207ENST00000480001 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
RARB-207ENST00000480001 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
RARB-207ENST00000480001 WIZO95785 1651 aa14.93□□□□□ -0.02
RARB-207ENST00000480001 FBLN2P98095 1184 aa14.9□□□□□ -0.02
RARB-207ENST00000480001 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
RARB-207ENST00000480001 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
RARB-207ENST00000480001 CHD1O14646 1710 aa14.88□□□□□ -0.03
RARB-207ENST00000480001 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
RARB-207ENST00000480001 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
RARB-207ENST00000480001 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
RARB-207ENST00000480001 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
RARB-207ENST00000480001 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
RARB-207ENST00000480001 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
RARB-207ENST00000480001 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
RARB-207ENST00000480001 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
RARB-207ENST00000480001 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
RARB-207ENST00000480001 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
RARB-207ENST00000480001 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
RARB-207ENST00000480001 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
RARB-207ENST00000480001 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
RARB-207ENST00000480001 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
RARB-207ENST00000480001 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
RARB-207ENST00000480001 MAGI1Q96QZ7 1491 aaPredicted RBP14.65□□□□□ -0.06
RARB-207ENST00000480001 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
RARB-207ENST00000480001 SOGA1O94964 1423 aa14.61□□□□□ -0.07
RARB-207ENST00000480001 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
RARB-207ENST00000480001 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
RARB-207ENST00000480001 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
RARB-207ENST00000480001 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
RARB-207ENST00000480001 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
RARB-207ENST00000480001 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
RARB-207ENST00000480001 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
RARB-207ENST00000480001 FAM69CQ0P6D2 419 aa14.43□□□□□ -0.1
RARB-207ENST00000480001 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
RARB-207ENST00000480001 ABCC10Q5T3U5 1492 aa14.4□□□□□ -0.1
RARB-207ENST00000480001 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
RARB-207ENST00000480001 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
RARB-207ENST00000480001 KDM6BO15054 1643 aa14.36□□□□□ -0.11
RARB-207ENST00000480001 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
RARB-207ENST00000480001 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
RARB-207ENST00000480001 NUP160Q12769 1436 aa14.35□□□□□ -0.11
RARB-207ENST00000480001 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
RARB-207ENST00000480001 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
RARB-207ENST00000480001 CUX1P39880 1505 aa14.31□□□□□ -0.12
RARB-207ENST00000480001 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms