RNA–Protein interactions for RNA: ENST00000479558.5

CERKL-212, Transcript of ceramide kinase like, humanhuman

TSL 2

Gene CERKL, Length 1,335 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-212ENST00000479558 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
CERKL-212ENST00000479558 ABCC9O60706 1549 aa30.62■■■□□ 2.49
CERKL-212ENST00000479558 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
CERKL-212ENST00000479558 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
CERKL-212ENST00000479558 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
CERKL-212ENST00000479558 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
CERKL-212ENST00000479558 NACADO15069 1562 aa28.66■■■□□ 2.18
CERKL-212ENST00000479558 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
CERKL-212ENST00000479558 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
CERKL-212ENST00000479558 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
CERKL-212ENST00000479558 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
CERKL-212ENST00000479558 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
CERKL-212ENST00000479558 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
CERKL-212ENST00000479558 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
CERKL-212ENST00000479558 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
CERKL-212ENST00000479558 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
CERKL-212ENST00000479558 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
CERKL-212ENST00000479558 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
CERKL-212ENST00000479558 EIF4G1Q04637 1599 aaKnown RBP27.47■■□□□ 1.99
CERKL-212ENST00000479558 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
CERKL-212ENST00000479558 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
CERKL-212ENST00000479558 CUX2O14529 1486 aa26.58■■□□□ 1.85
CERKL-212ENST00000479558 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
CERKL-212ENST00000479558 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
CERKL-212ENST00000479558 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
CERKL-212ENST00000479558 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
CERKL-212ENST00000479558 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
CERKL-212ENST00000479558 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
CERKL-212ENST00000479558 NESP48681 1621 aa26.16■■□□□ 1.78
CERKL-212ENST00000479558 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
CERKL-212ENST00000479558 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
CERKL-212ENST00000479558 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
CERKL-212ENST00000479558 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
CERKL-212ENST00000479558 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
CERKL-212ENST00000479558 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
CERKL-212ENST00000479558 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
CERKL-212ENST00000479558 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
CERKL-212ENST00000479558 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
CERKL-212ENST00000479558 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.7
CERKL-212ENST00000479558 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
CERKL-212ENST00000479558 WDR62O43379 1518 aa25.54■■□□□ 1.68
CERKL-212ENST00000479558 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
CERKL-212ENST00000479558 WIZO95785 1651 aa25.42■■□□□ 1.66
CERKL-212ENST00000479558 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
CERKL-212ENST00000479558 OSCARQ8IYS5 282 aa25.33■■□□□ 1.64
CERKL-212ENST00000479558 CFTRP13569 1480 aa25.24■■□□□ 1.63
CERKL-212ENST00000479558 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
CERKL-212ENST00000479558 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.6
CERKL-212ENST00000479558 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
CERKL-212ENST00000479558 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
CERKL-212ENST00000479558 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
CERKL-212ENST00000479558 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
CERKL-212ENST00000479558 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
CERKL-212ENST00000479558 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
CERKL-212ENST00000479558 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
CERKL-212ENST00000479558 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
CERKL-212ENST00000479558 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
CERKL-212ENST00000479558 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
CERKL-212ENST00000479558 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
CERKL-212ENST00000479558 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
CERKL-212ENST00000479558 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
CERKL-212ENST00000479558 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
CERKL-212ENST00000479558 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
CERKL-212ENST00000479558 CHD1O14646 1710 aa24.67■■□□□ 1.54
CERKL-212ENST00000479558 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.54
CERKL-212ENST00000479558 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
CERKL-212ENST00000479558 FBLN2P98095 1184 aa24.61■■□□□ 1.53
CERKL-212ENST00000479558 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
CERKL-212ENST00000479558 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
CERKL-212ENST00000479558 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
CERKL-212ENST00000479558 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
CERKL-212ENST00000479558 SOGA1O94964 1423 aa24.43■■□□□ 1.5
CERKL-212ENST00000479558 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
CERKL-212ENST00000479558 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
CERKL-212ENST00000479558 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
CERKL-212ENST00000479558 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
CERKL-212ENST00000479558 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
CERKL-212ENST00000479558 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
CERKL-212ENST00000479558 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
CERKL-212ENST00000479558 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
CERKL-212ENST00000479558 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
CERKL-212ENST00000479558 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
CERKL-212ENST00000479558 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
CERKL-212ENST00000479558 CUX1P39880 1505 aa24.21■■□□□ 1.47
CERKL-212ENST00000479558 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
CERKL-212ENST00000479558 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
CERKL-212ENST00000479558 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
CERKL-212ENST00000479558 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
CERKL-212ENST00000479558 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
CERKL-212ENST00000479558 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
CERKL-212ENST00000479558 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
CERKL-212ENST00000479558 NUP160Q12769 1436 aa23.87■■□□□ 1.41
CERKL-212ENST00000479558 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
CERKL-212ENST00000479558 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
CERKL-212ENST00000479558 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
CERKL-212ENST00000479558 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
CERKL-212ENST00000479558 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
CERKL-212ENST00000479558 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
CERKL-212ENST00000479558 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
CERKL-212ENST00000479558 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms