RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
CDK11A-216ENST00000479362 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CDK11A-216ENST00000479362 ABCC9O60706 1549 aa23.59■■□□□ 1.37
CDK11A-216ENST00000479362 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
CDK11A-216ENST00000479362 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
CDK11A-216ENST00000479362 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
CDK11A-216ENST00000479362 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
CDK11A-216ENST00000479362 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
CDK11A-216ENST00000479362 NACADO15069 1562 aa21.74■■□□□ 1.07
CDK11A-216ENST00000479362 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
CDK11A-216ENST00000479362 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
CDK11A-216ENST00000479362 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
CDK11A-216ENST00000479362 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
CDK11A-216ENST00000479362 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
CDK11A-216ENST00000479362 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
CDK11A-216ENST00000479362 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
CDK11A-216ENST00000479362 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
CDK11A-216ENST00000479362 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
CDK11A-216ENST00000479362 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
CDK11A-216ENST00000479362 CUX2O14529 1486 aa20.69■□□□□ 0.9
CDK11A-216ENST00000479362 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
CDK11A-216ENST00000479362 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
CDK11A-216ENST00000479362 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CDK11A-216ENST00000479362 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
CDK11A-216ENST00000479362 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
CDK11A-216ENST00000479362 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
CDK11A-216ENST00000479362 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
CDK11A-216ENST00000479362 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
CDK11A-216ENST00000479362 NESP48681 1621 aa20.07■□□□□ 0.8
CDK11A-216ENST00000479362 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
CDK11A-216ENST00000479362 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
CDK11A-216ENST00000479362 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
CDK11A-216ENST00000479362 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
CDK11A-216ENST00000479362 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
CDK11A-216ENST00000479362 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
CDK11A-216ENST00000479362 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
CDK11A-216ENST00000479362 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
CDK11A-216ENST00000479362 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
CDK11A-216ENST00000479362 WDR62O43379 1518 aa19.58■□□□□ 0.73
CDK11A-216ENST00000479362 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CDK11A-216ENST00000479362 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
CDK11A-216ENST00000479362 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CDK11A-216ENST00000479362 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
CDK11A-216ENST00000479362 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
CDK11A-216ENST00000479362 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
CDK11A-216ENST00000479362 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
CDK11A-216ENST00000479362 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
CDK11A-216ENST00000479362 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
CDK11A-216ENST00000479362 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.67
CDK11A-216ENST00000479362 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
CDK11A-216ENST00000479362 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
CDK11A-216ENST00000479362 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
CDK11A-216ENST00000479362 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
CDK11A-216ENST00000479362 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
CDK11A-216ENST00000479362 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
CDK11A-216ENST00000479362 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
CDK11A-216ENST00000479362 CFTRP13569 1480 aa19.03■□□□□ 0.64
CDK11A-216ENST00000479362 WIZO95785 1651 aa19.01■□□□□ 0.63
CDK11A-216ENST00000479362 CHD1O14646 1710 aa18.95■□□□□ 0.62
CDK11A-216ENST00000479362 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
CDK11A-216ENST00000479362 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
CDK11A-216ENST00000479362 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
CDK11A-216ENST00000479362 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
CDK11A-216ENST00000479362 FOXD1Q16676 465 aa18.83■□□□□ 0.6
CDK11A-216ENST00000479362 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
CDK11A-216ENST00000479362 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK11A-216ENST00000479362 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.58
CDK11A-216ENST00000479362 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
CDK11A-216ENST00000479362 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
CDK11A-216ENST00000479362 FBLN2P98095 1184 aa18.67■□□□□ 0.58
CDK11A-216ENST00000479362 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
CDK11A-216ENST00000479362 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
CDK11A-216ENST00000479362 ILDR1Q86SU0 546 aaPredicted RBP18.58■□□□□ 0.56
CDK11A-216ENST00000479362 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
CDK11A-216ENST00000479362 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CDK11A-216ENST00000479362 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
CDK11A-216ENST00000479362 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
CDK11A-216ENST00000479362 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
CDK11A-216ENST00000479362 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
CDK11A-216ENST00000479362 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
CDK11A-216ENST00000479362 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
CDK11A-216ENST00000479362 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
CDK11A-216ENST00000479362 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CDK11A-216ENST00000479362 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
CDK11A-216ENST00000479362 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-216ENST00000479362 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
CDK11A-216ENST00000479362 SOGA1O94964 1423 aa18.36■□□□□ 0.53
CDK11A-216ENST00000479362 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
CDK11A-216ENST00000479362 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
CDK11A-216ENST00000479362 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
CDK11A-216ENST00000479362 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CDK11A-216ENST00000479362 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
CDK11A-216ENST00000479362 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
CDK11A-216ENST00000479362 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
CDK11A-216ENST00000479362 CUX1P39880 1505 aa18.16■□□□□ 0.5
CDK11A-216ENST00000479362 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
CDK11A-216ENST00000479362 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
CDK11A-216ENST00000479362 ADRA2BP18089 450 aa18.12■□□□□ 0.49
CDK11A-216ENST00000479362 ABCC10Q5T3U5 1492 aa18.12■□□□□ 0.49
CDK11A-216ENST00000479362 KDM6BO15054 1643 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms