RNA–Protein interactions for RNA: ENST00000478504.1

COA1-217, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 4

Gene COA1, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-217ENST00000478504 NISCHQ9Y2I1 1504 aa25.26■■□□□ 1.63
COA1-217ENST00000478504 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
COA1-217ENST00000478504 ABCC9O60706 1549 aa22.53■■□□□ 1.2
COA1-217ENST00000478504 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
COA1-217ENST00000478504 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
COA1-217ENST00000478504 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
COA1-217ENST00000478504 NACADO15069 1562 aa21.42■■□□□ 1.02
COA1-217ENST00000478504 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
COA1-217ENST00000478504 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
COA1-217ENST00000478504 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
COA1-217ENST00000478504 PABPN1Q86U42 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
COA1-217ENST00000478504 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
COA1-217ENST00000478504 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
COA1-217ENST00000478504 UNC13AQ9UPW8 1703 aa20.89■□□□□ 0.93
COA1-217ENST00000478504 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
COA1-217ENST00000478504 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
COA1-217ENST00000478504 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
COA1-217ENST00000478504 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
COA1-217ENST00000478504 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
COA1-217ENST00000478504 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
COA1-217ENST00000478504 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
COA1-217ENST00000478504 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
COA1-217ENST00000478504 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
COA1-217ENST00000478504 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
COA1-217ENST00000478504 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
COA1-217ENST00000478504 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
COA1-217ENST00000478504 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
COA1-217ENST00000478504 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
COA1-217ENST00000478504 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
COA1-217ENST00000478504 CUX2O14529 1486 aa19.48■□□□□ 0.71
COA1-217ENST00000478504 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
COA1-217ENST00000478504 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
COA1-217ENST00000478504 NESP48681 1621 aa19.36■□□□□ 0.69
COA1-217ENST00000478504 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
COA1-217ENST00000478504 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
COA1-217ENST00000478504 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
COA1-217ENST00000478504 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
COA1-217ENST00000478504 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
COA1-217ENST00000478504 WIZO95785 1651 aa19.14■□□□□ 0.65
COA1-217ENST00000478504 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
COA1-217ENST00000478504 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
COA1-217ENST00000478504 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
COA1-217ENST00000478504 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
COA1-217ENST00000478504 CFTRP13569 1480 aa18.97■□□□□ 0.63
COA1-217ENST00000478504 WDR62O43379 1518 aa18.95■□□□□ 0.62
COA1-217ENST00000478504 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
COA1-217ENST00000478504 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
COA1-217ENST00000478504 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
COA1-217ENST00000478504 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
COA1-217ENST00000478504 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
COA1-217ENST00000478504 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
COA1-217ENST00000478504 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
COA1-217ENST00000478504 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
COA1-217ENST00000478504 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
COA1-217ENST00000478504 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
COA1-217ENST00000478504 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
COA1-217ENST00000478504 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
COA1-217ENST00000478504 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
COA1-217ENST00000478504 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
COA1-217ENST00000478504 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
COA1-217ENST00000478504 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
COA1-217ENST00000478504 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
COA1-217ENST00000478504 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
COA1-217ENST00000478504 SOGA1O94964 1423 aa18.32■□□□□ 0.52
COA1-217ENST00000478504 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
COA1-217ENST00000478504 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
COA1-217ENST00000478504 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
COA1-217ENST00000478504 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
COA1-217ENST00000478504 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
COA1-217ENST00000478504 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
COA1-217ENST00000478504 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
COA1-217ENST00000478504 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
COA1-217ENST00000478504 CUX1P39880 1505 aa18.25■□□□□ 0.51
COA1-217ENST00000478504 FBLN2P98095 1184 aa18.22■□□□□ 0.51
COA1-217ENST00000478504 CHD1O14646 1710 aa18.18■□□□□ 0.5
COA1-217ENST00000478504 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
COA1-217ENST00000478504 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
COA1-217ENST00000478504 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
COA1-217ENST00000478504 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
COA1-217ENST00000478504 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
COA1-217ENST00000478504 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
COA1-217ENST00000478504 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
COA1-217ENST00000478504 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
COA1-217ENST00000478504 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
COA1-217ENST00000478504 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
COA1-217ENST00000478504 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
COA1-217ENST00000478504 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
COA1-217ENST00000478504 CLASP1Q7Z460 1538 aa18.06■□□□□ 0.48
COA1-217ENST00000478504 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
COA1-217ENST00000478504 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
COA1-217ENST00000478504 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
COA1-217ENST00000478504 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
COA1-217ENST00000478504 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
COA1-217ENST00000478504 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
COA1-217ENST00000478504 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
COA1-217ENST00000478504 NUP160Q12769 1436 aa17.88■□□□□ 0.45
COA1-217ENST00000478504 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
COA1-217ENST00000478504 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
COA1-217ENST00000478504 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
COA1-217ENST00000478504 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms