RNA–Protein interactions for RNA: ENST00000478220.5

NME9-207, Transcript of NME/NM23 family member 9, humanhuman

TSL 4

Gene NME9, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-207ENST00000478220 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
NME9-207ENST00000478220 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
NME9-207ENST00000478220 ABCC9O60706 1549 aa25.4■■□□□ 1.66
NME9-207ENST00000478220 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
NME9-207ENST00000478220 NACADO15069 1562 aa24.02■■□□□ 1.44
NME9-207ENST00000478220 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
NME9-207ENST00000478220 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
NME9-207ENST00000478220 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
NME9-207ENST00000478220 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
NME9-207ENST00000478220 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
NME9-207ENST00000478220 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
NME9-207ENST00000478220 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
NME9-207ENST00000478220 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
NME9-207ENST00000478220 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
NME9-207ENST00000478220 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
NME9-207ENST00000478220 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
NME9-207ENST00000478220 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
NME9-207ENST00000478220 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
NME9-207ENST00000478220 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
NME9-207ENST00000478220 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
NME9-207ENST00000478220 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
NME9-207ENST00000478220 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
NME9-207ENST00000478220 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
NME9-207ENST00000478220 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
NME9-207ENST00000478220 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
NME9-207ENST00000478220 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
NME9-207ENST00000478220 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
NME9-207ENST00000478220 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
NME9-207ENST00000478220 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
NME9-207ENST00000478220 NESP48681 1621 aa21.91■■□□□ 1.1
NME9-207ENST00000478220 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
NME9-207ENST00000478220 CUX2O14529 1486 aa21.74■■□□□ 1.07
NME9-207ENST00000478220 WIZO95785 1651 aa21.74■■□□□ 1.07
NME9-207ENST00000478220 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
NME9-207ENST00000478220 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
NME9-207ENST00000478220 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
NME9-207ENST00000478220 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
NME9-207ENST00000478220 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
NME9-207ENST00000478220 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
NME9-207ENST00000478220 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
NME9-207ENST00000478220 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
NME9-207ENST00000478220 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
NME9-207ENST00000478220 CFTRP13569 1480 aa21.34■■□□□ 1.01
NME9-207ENST00000478220 WDR62O43379 1518 aa21.31■■□□□ 1
NME9-207ENST00000478220 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
NME9-207ENST00000478220 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
NME9-207ENST00000478220 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
NME9-207ENST00000478220 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
NME9-207ENST00000478220 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
NME9-207ENST00000478220 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
NME9-207ENST00000478220 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
NME9-207ENST00000478220 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
NME9-207ENST00000478220 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
NME9-207ENST00000478220 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
NME9-207ENST00000478220 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
NME9-207ENST00000478220 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
NME9-207ENST00000478220 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
NME9-207ENST00000478220 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
NME9-207ENST00000478220 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
NME9-207ENST00000478220 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
NME9-207ENST00000478220 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
NME9-207ENST00000478220 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
NME9-207ENST00000478220 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
NME9-207ENST00000478220 CUX1P39880 1505 aa20.66■□□□□ 0.9
NME9-207ENST00000478220 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
NME9-207ENST00000478220 SOGA1O94964 1423 aa20.61■□□□□ 0.89
NME9-207ENST00000478220 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
NME9-207ENST00000478220 CHD1O14646 1710 aa20.56■□□□□ 0.88
NME9-207ENST00000478220 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
NME9-207ENST00000478220 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
NME9-207ENST00000478220 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
NME9-207ENST00000478220 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
NME9-207ENST00000478220 FBLN2P98095 1184 aa20.49■□□□□ 0.87
NME9-207ENST00000478220 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
NME9-207ENST00000478220 SNAPC4Q5SXM2 1469 aa20.47■□□□□ 0.87
NME9-207ENST00000478220 GRIN2BQ13224 1484 aa20.4■□□□□ 0.86
NME9-207ENST00000478220 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
NME9-207ENST00000478220 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
NME9-207ENST00000478220 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
NME9-207ENST00000478220 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
NME9-207ENST00000478220 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
NME9-207ENST00000478220 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
NME9-207ENST00000478220 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
NME9-207ENST00000478220 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
NME9-207ENST00000478220 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
NME9-207ENST00000478220 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.85
NME9-207ENST00000478220 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
NME9-207ENST00000478220 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
NME9-207ENST00000478220 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
NME9-207ENST00000478220 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
NME9-207ENST00000478220 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
NME9-207ENST00000478220 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
NME9-207ENST00000478220 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
NME9-207ENST00000478220 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
NME9-207ENST00000478220 ERCC6L2Q5T890 1561 aa20.11■□□□□ 0.81
NME9-207ENST00000478220 NUP160Q12769 1436 aa20.1■□□□□ 0.81
NME9-207ENST00000478220 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
NME9-207ENST00000478220 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
NME9-207ENST00000478220 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
NME9-207ENST00000478220 SHROOM2Q13796 1616 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 403 ms