RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
PRPF3-205ENST00000476970 ABCC9O60706 1549 aa17.78■□□□□ 0.44
PRPF3-205ENST00000476970 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
PRPF3-205ENST00000476970 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
PRPF3-205ENST00000476970 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
PRPF3-205ENST00000476970 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
PRPF3-205ENST00000476970 NACADO15069 1562 aa16.56■□□□□ 0.24
PRPF3-205ENST00000476970 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
PRPF3-205ENST00000476970 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
PRPF3-205ENST00000476970 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF3-205ENST00000476970 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
PRPF3-205ENST00000476970 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
PRPF3-205ENST00000476970 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
PRPF3-205ENST00000476970 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
PRPF3-205ENST00000476970 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
PRPF3-205ENST00000476970 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
PRPF3-205ENST00000476970 DNAJC5Q9H3Z4 198 aa16.05■□□□□ 0.16
PRPF3-205ENST00000476970 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
PRPF3-205ENST00000476970 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
PRPF3-205ENST00000476970 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
PRPF3-205ENST00000476970 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
PRPF3-205ENST00000476970 CUX2O14529 1486 aa15.62■□□□□ 0.09
PRPF3-205ENST00000476970 ERCC6Q03468 1493 aa15.46■□□□□ 0.06
PRPF3-205ENST00000476970 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
PRPF3-205ENST00000476970 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
PRPF3-205ENST00000476970 THOC2Q8NI27 1593 aaKnown RBP15.15■□□□□ 0.02
PRPF3-205ENST00000476970 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
PRPF3-205ENST00000476970 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
PRPF3-205ENST00000476970 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
PRPF3-205ENST00000476970 NESP48681 1621 aa15.11■□□□□ 0.01
PRPF3-205ENST00000476970 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
PRPF3-205ENST00000476970 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
PRPF3-205ENST00000476970 SMARCA4P51532 1647 aa15.03■□□□□ -0
PRPF3-205ENST00000476970 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
PRPF3-205ENST00000476970 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
PRPF3-205ENST00000476970 PDS5BQ9NTI5 1447 aa14.94□□□□□ -0.02
PRPF3-205ENST00000476970 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
PRPF3-205ENST00000476970 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
PRPF3-205ENST00000476970 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-205ENST00000476970 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
PRPF3-205ENST00000476970 WDR62O43379 1518 aa14.83□□□□□ -0.04
PRPF3-205ENST00000476970 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
PRPF3-205ENST00000476970 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
PRPF3-205ENST00000476970 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
PRPF3-205ENST00000476970 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
PRPF3-205ENST00000476970 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
PRPF3-205ENST00000476970 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
PRPF3-205ENST00000476970 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
PRPF3-205ENST00000476970 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
PRPF3-205ENST00000476970 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
PRPF3-205ENST00000476970 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
PRPF3-205ENST00000476970 CFTRP13569 1480 aa14.49□□□□□ -0.09
PRPF3-205ENST00000476970 WIZO95785 1651 aa14.49□□□□□ -0.09
PRPF3-205ENST00000476970 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
PRPF3-205ENST00000476970 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
PRPF3-205ENST00000476970 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
PRPF3-205ENST00000476970 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
PRPF3-205ENST00000476970 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
PRPF3-205ENST00000476970 CHD1O14646 1710 aa14.35□□□□□ -0.11
PRPF3-205ENST00000476970 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
PRPF3-205ENST00000476970 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
PRPF3-205ENST00000476970 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-205ENST00000476970 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
PRPF3-205ENST00000476970 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
PRPF3-205ENST00000476970 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
PRPF3-205ENST00000476970 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
PRPF3-205ENST00000476970 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
PRPF3-205ENST00000476970 FBLN2P98095 1184 aa14.17□□□□□ -0.14
PRPF3-205ENST00000476970 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRPF3-205ENST00000476970 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
PRPF3-205ENST00000476970 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
PRPF3-205ENST00000476970 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
PRPF3-205ENST00000476970 FOXD1Q16676 465 aa14.1□□□□□ -0.15
PRPF3-205ENST00000476970 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
PRPF3-205ENST00000476970 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
PRPF3-205ENST00000476970 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
PRPF3-205ENST00000476970 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
PRPF3-205ENST00000476970 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
PRPF3-205ENST00000476970 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
PRPF3-205ENST00000476970 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
PRPF3-205ENST00000476970 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
PRPF3-205ENST00000476970 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
PRPF3-205ENST00000476970 SOGA1O94964 1423 aa13.98□□□□□ -0.17
PRPF3-205ENST00000476970 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
PRPF3-205ENST00000476970 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
PRPF3-205ENST00000476970 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
PRPF3-205ENST00000476970 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
PRPF3-205ENST00000476970 CUX1P39880 1505 aa13.82□□□□□ -0.2
PRPF3-205ENST00000476970 ERCC6L2Q5T890 1561 aa13.82□□□□□ -0.2
PRPF3-205ENST00000476970 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
PRPF3-205ENST00000476970 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
PRPF3-205ENST00000476970 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
PRPF3-205ENST00000476970 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
PRPF3-205ENST00000476970 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
PRPF3-205ENST00000476970 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
PRPF3-205ENST00000476970 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
PRPF3-205ENST00000476970 NUP160Q12769 1436 aa13.74□□□□□ -0.21
PRPF3-205ENST00000476970 KDM6BO15054 1643 aa13.72□□□□□ -0.21
PRPF3-205ENST00000476970 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
PRPF3-205ENST00000476970 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 222.4 ms