RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
EXOSC1-208ENST00000476234 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
EXOSC1-208ENST00000476234 ABCC9O60706 1549 aa25.63■■□□□ 1.69
EXOSC1-208ENST00000476234 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
EXOSC1-208ENST00000476234 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
EXOSC1-208ENST00000476234 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
EXOSC1-208ENST00000476234 NACADO15069 1562 aa24.11■■□□□ 1.45
EXOSC1-208ENST00000476234 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
EXOSC1-208ENST00000476234 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
EXOSC1-208ENST00000476234 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
EXOSC1-208ENST00000476234 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
EXOSC1-208ENST00000476234 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
EXOSC1-208ENST00000476234 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
EXOSC1-208ENST00000476234 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
EXOSC1-208ENST00000476234 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.32
EXOSC1-208ENST00000476234 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
EXOSC1-208ENST00000476234 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
EXOSC1-208ENST00000476234 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
EXOSC1-208ENST00000476234 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
EXOSC1-208ENST00000476234 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
EXOSC1-208ENST00000476234 DNAJC5Q9H3Z4 198 aa22.58■■□□□ 1.21
EXOSC1-208ENST00000476234 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
EXOSC1-208ENST00000476234 CUX2O14529 1486 aa22.27■■□□□ 1.16
EXOSC1-208ENST00000476234 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
EXOSC1-208ENST00000476234 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
EXOSC1-208ENST00000476234 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
EXOSC1-208ENST00000476234 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
EXOSC1-208ENST00000476234 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
EXOSC1-208ENST00000476234 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
EXOSC1-208ENST00000476234 NESP48681 1621 aa21.95■■□□□ 1.1
EXOSC1-208ENST00000476234 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
EXOSC1-208ENST00000476234 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
EXOSC1-208ENST00000476234 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
EXOSC1-208ENST00000476234 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
EXOSC1-208ENST00000476234 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
EXOSC1-208ENST00000476234 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
EXOSC1-208ENST00000476234 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
EXOSC1-208ENST00000476234 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
EXOSC1-208ENST00000476234 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
EXOSC1-208ENST00000476234 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
EXOSC1-208ENST00000476234 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
EXOSC1-208ENST00000476234 WDR62O43379 1518 aa21.47■■□□□ 1.03
EXOSC1-208ENST00000476234 WIZO95785 1651 aa21.4■■□□□ 1.02
EXOSC1-208ENST00000476234 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
EXOSC1-208ENST00000476234 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
EXOSC1-208ENST00000476234 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
EXOSC1-208ENST00000476234 CFTRP13569 1480 aa21.27■■□□□ 1
EXOSC1-208ENST00000476234 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
EXOSC1-208ENST00000476234 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
EXOSC1-208ENST00000476234 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
EXOSC1-208ENST00000476234 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
EXOSC1-208ENST00000476234 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
EXOSC1-208ENST00000476234 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
EXOSC1-208ENST00000476234 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
EXOSC1-208ENST00000476234 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
EXOSC1-208ENST00000476234 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
EXOSC1-208ENST00000476234 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
EXOSC1-208ENST00000476234 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
EXOSC1-208ENST00000476234 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
EXOSC1-208ENST00000476234 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
EXOSC1-208ENST00000476234 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
EXOSC1-208ENST00000476234 EIF4G3O43432 1585 aaKnown RBP20.78■□□□□ 0.92
EXOSC1-208ENST00000476234 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
EXOSC1-208ENST00000476234 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
EXOSC1-208ENST00000476234 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■□□ 15.2
EXOSC1-208ENST00000476234 CHD1O14646 1710 aa20.66■□□□□ 0.9
EXOSC1-208ENST00000476234 FOXD1Q16676 465 aa20.65■□□□□ 0.9
EXOSC1-208ENST00000476234 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
EXOSC1-208ENST00000476234 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
EXOSC1-208ENST00000476234 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
EXOSC1-208ENST00000476234 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
EXOSC1-208ENST00000476234 FBLN2P98095 1184 aa20.52■□□□□ 0.88
EXOSC1-208ENST00000476234 SOGA1O94964 1423 aa20.52■□□□□ 0.87
EXOSC1-208ENST00000476234 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
EXOSC1-208ENST00000476234 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
EXOSC1-208ENST00000476234 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
EXOSC1-208ENST00000476234 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
EXOSC1-208ENST00000476234 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
EXOSC1-208ENST00000476234 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
EXOSC1-208ENST00000476234 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
EXOSC1-208ENST00000476234 CUX1P39880 1505 aa20.41■□□□□ 0.86
EXOSC1-208ENST00000476234 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
EXOSC1-208ENST00000476234 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
EXOSC1-208ENST00000476234 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
EXOSC1-208ENST00000476234 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
EXOSC1-208ENST00000476234 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
EXOSC1-208ENST00000476234 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
EXOSC1-208ENST00000476234 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
EXOSC1-208ENST00000476234 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
EXOSC1-208ENST00000476234 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
EXOSC1-208ENST00000476234 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
EXOSC1-208ENST00000476234 NUP160Q12769 1436 aa20.1■□□□□ 0.81
EXOSC1-208ENST00000476234 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
EXOSC1-208ENST00000476234 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
EXOSC1-208ENST00000476234 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
EXOSC1-208ENST00000476234 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
EXOSC1-208ENST00000476234 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
EXOSC1-208ENST00000476234 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
EXOSC1-208ENST00000476234 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
EXOSC1-208ENST00000476234 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms