RNA–Protein interactions for RNA: ENST00000475929.5

ABCB1-203, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 787 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-203ENST00000475929 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
ABCB1-203ENST00000475929 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
ABCB1-203ENST00000475929 ABCC9O60706 1549 aa23.16■■□□□ 1.3
ABCB1-203ENST00000475929 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
ABCB1-203ENST00000475929 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
ABCB1-203ENST00000475929 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
ABCB1-203ENST00000475929 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
ABCB1-203ENST00000475929 NACADO15069 1562 aa21.61■■□□□ 1.05
ABCB1-203ENST00000475929 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
ABCB1-203ENST00000475929 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
ABCB1-203ENST00000475929 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
ABCB1-203ENST00000475929 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
ABCB1-203ENST00000475929 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
ABCB1-203ENST00000475929 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
ABCB1-203ENST00000475929 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
ABCB1-203ENST00000475929 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
ABCB1-203ENST00000475929 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
ABCB1-203ENST00000475929 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
ABCB1-203ENST00000475929 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
ABCB1-203ENST00000475929 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
ABCB1-203ENST00000475929 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
ABCB1-203ENST00000475929 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
ABCB1-203ENST00000475929 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
ABCB1-203ENST00000475929 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
ABCB1-203ENST00000475929 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
ABCB1-203ENST00000475929 CUX2O14529 1486 aa19.93■□□□□ 0.78
ABCB1-203ENST00000475929 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
ABCB1-203ENST00000475929 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
ABCB1-203ENST00000475929 NESP48681 1621 aa19.85■□□□□ 0.77
ABCB1-203ENST00000475929 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
ABCB1-203ENST00000475929 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
ABCB1-203ENST00000475929 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
ABCB1-203ENST00000475929 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
ABCB1-203ENST00000475929 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
ABCB1-203ENST00000475929 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
ABCB1-203ENST00000475929 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
ABCB1-203ENST00000475929 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
ABCB1-203ENST00000475929 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
ABCB1-203ENST00000475929 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
ABCB1-203ENST00000475929 WIZO95785 1651 aa19.37■□□□□ 0.69
ABCB1-203ENST00000475929 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
ABCB1-203ENST00000475929 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
ABCB1-203ENST00000475929 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
ABCB1-203ENST00000475929 WDR62O43379 1518 aa19.29■□□□□ 0.68
ABCB1-203ENST00000475929 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
ABCB1-203ENST00000475929 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
ABCB1-203ENST00000475929 CFTRP13569 1480 aa19.1■□□□□ 0.65
ABCB1-203ENST00000475929 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
ABCB1-203ENST00000475929 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
ABCB1-203ENST00000475929 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
ABCB1-203ENST00000475929 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
ABCB1-203ENST00000475929 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
ABCB1-203ENST00000475929 FOXD1Q16676 465 aa18.91■□□□□ 0.62
ABCB1-203ENST00000475929 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
ABCB1-203ENST00000475929 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
ABCB1-203ENST00000475929 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
ABCB1-203ENST00000475929 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
ABCB1-203ENST00000475929 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
ABCB1-203ENST00000475929 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
ABCB1-203ENST00000475929 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
ABCB1-203ENST00000475929 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
ABCB1-203ENST00000475929 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
ABCB1-203ENST00000475929 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
ABCB1-203ENST00000475929 CHD1O14646 1710 aa18.68■□□□□ 0.58
ABCB1-203ENST00000475929 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
ABCB1-203ENST00000475929 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
ABCB1-203ENST00000475929 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
ABCB1-203ENST00000475929 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
ABCB1-203ENST00000475929 POLA1P09884 1462 aaPredicted RBP18.59■□□□□ 0.57
ABCB1-203ENST00000475929 FBLN2P98095 1184 aa18.59■□□□□ 0.57
ABCB1-203ENST00000475929 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
ABCB1-203ENST00000475929 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
ABCB1-203ENST00000475929 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
ABCB1-203ENST00000475929 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
ABCB1-203ENST00000475929 SOGA1O94964 1423 aa18.48■□□□□ 0.55
ABCB1-203ENST00000475929 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
ABCB1-203ENST00000475929 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
ABCB1-203ENST00000475929 CUX1P39880 1505 aa18.42■□□□□ 0.54
ABCB1-203ENST00000475929 CLASP1Q7Z460 1538 aa18.41■□□□□ 0.54
ABCB1-203ENST00000475929 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
ABCB1-203ENST00000475929 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
ABCB1-203ENST00000475929 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
ABCB1-203ENST00000475929 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
ABCB1-203ENST00000475929 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
ABCB1-203ENST00000475929 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
ABCB1-203ENST00000475929 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
ABCB1-203ENST00000475929 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
ABCB1-203ENST00000475929 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
ABCB1-203ENST00000475929 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
ABCB1-203ENST00000475929 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
ABCB1-203ENST00000475929 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
ABCB1-203ENST00000475929 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
ABCB1-203ENST00000475929 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
ABCB1-203ENST00000475929 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
ABCB1-203ENST00000475929 NUP160Q12769 1436 aa18.06■□□□□ 0.48
ABCB1-203ENST00000475929 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
ABCB1-203ENST00000475929 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
ABCB1-203ENST00000475929 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
ABCB1-203ENST00000475929 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
ABCB1-203ENST00000475929 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms