RNA–Protein interactions for RNA: ENST00000474939.1

PRKAB2-202, Transcript of protein kinase AMP-activated non-catalytic subunit beta 2, humanhuman

TSL 4

Gene PRKAB2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB2-202ENST00000474939 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
PRKAB2-202ENST00000474939 ABCC9O60706 1549 aa25.6■■□□□ 1.69
PRKAB2-202ENST00000474939 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
PRKAB2-202ENST00000474939 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
PRKAB2-202ENST00000474939 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
PRKAB2-202ENST00000474939 NACADO15069 1562 aa23.91■■□□□ 1.42
PRKAB2-202ENST00000474939 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
PRKAB2-202ENST00000474939 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
PRKAB2-202ENST00000474939 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
PRKAB2-202ENST00000474939 BICRAQ9NZM4 1560 aa23.41■■□□□ 1.34
PRKAB2-202ENST00000474939 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
PRKAB2-202ENST00000474939 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
PRKAB2-202ENST00000474939 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
PRKAB2-202ENST00000474939 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
PRKAB2-202ENST00000474939 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
PRKAB2-202ENST00000474939 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
PRKAB2-202ENST00000474939 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
PRKAB2-202ENST00000474939 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
PRKAB2-202ENST00000474939 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
PRKAB2-202ENST00000474939 CUX2O14529 1486 aa22.29■■□□□ 1.16
PRKAB2-202ENST00000474939 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
PRKAB2-202ENST00000474939 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
PRKAB2-202ENST00000474939 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
PRKAB2-202ENST00000474939 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
PRKAB2-202ENST00000474939 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
PRKAB2-202ENST00000474939 NESP48681 1621 aa21.82■■□□□ 1.08
PRKAB2-202ENST00000474939 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
PRKAB2-202ENST00000474939 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
PRKAB2-202ENST00000474939 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
PRKAB2-202ENST00000474939 LAMC3Q9Y6N6 1575 aa21.66■■□□□ 1.06
PRKAB2-202ENST00000474939 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
PRKAB2-202ENST00000474939 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
PRKAB2-202ENST00000474939 KIF21AQ7Z4S6 1674 aa21.58■■□□□ 1.05
PRKAB2-202ENST00000474939 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
PRKAB2-202ENST00000474939 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
PRKAB2-202ENST00000474939 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.02
PRKAB2-202ENST00000474939 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
PRKAB2-202ENST00000474939 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
PRKAB2-202ENST00000474939 WDR62O43379 1518 aa21.33■■□□□ 1
PRKAB2-202ENST00000474939 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
PRKAB2-202ENST00000474939 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
PRKAB2-202ENST00000474939 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
PRKAB2-202ENST00000474939 WIZO95785 1651 aa21.12■□□□□ 0.97
PRKAB2-202ENST00000474939 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
PRKAB2-202ENST00000474939 CFTRP13569 1480 aa21.01■□□□□ 0.95
PRKAB2-202ENST00000474939 RIMBP3CA6NJZ7 1639 aa20.95■□□□□ 0.94
PRKAB2-202ENST00000474939 RIMBP3BA6NNM3 1639 aa20.95■□□□□ 0.94
PRKAB2-202ENST00000474939 RIMBP3Q9UFD9 1639 aa20.95■□□□□ 0.94
PRKAB2-202ENST00000474939 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
PRKAB2-202ENST00000474939 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
PRKAB2-202ENST00000474939 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
PRKAB2-202ENST00000474939 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
PRKAB2-202ENST00000474939 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PRKAB2-202ENST00000474939 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
PRKAB2-202ENST00000474939 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
PRKAB2-202ENST00000474939 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
PRKAB2-202ENST00000474939 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
PRKAB2-202ENST00000474939 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
PRKAB2-202ENST00000474939 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
PRKAB2-202ENST00000474939 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
PRKAB2-202ENST00000474939 CHD1O14646 1710 aa20.62■□□□□ 0.89
PRKAB2-202ENST00000474939 FBLN2P98095 1184 aa20.58■□□□□ 0.89
PRKAB2-202ENST00000474939 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
PRKAB2-202ENST00000474939 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
PRKAB2-202ENST00000474939 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
PRKAB2-202ENST00000474939 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.881e-7■■■■□ 26.3
PRKAB2-202ENST00000474939 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
PRKAB2-202ENST00000474939 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
PRKAB2-202ENST00000474939 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
PRKAB2-202ENST00000474939 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
PRKAB2-202ENST00000474939 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 SOGA1O94964 1423 aa20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
PRKAB2-202ENST00000474939 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
PRKAB2-202ENST00000474939 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
PRKAB2-202ENST00000474939 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
PRKAB2-202ENST00000474939 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
PRKAB2-202ENST00000474939 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
PRKAB2-202ENST00000474939 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
PRKAB2-202ENST00000474939 PBRM1Q86U86 1689 aa20.14■□□□□ 0.81
PRKAB2-202ENST00000474939 CUX1P39880 1505 aa20.12■□□□□ 0.81
PRKAB2-202ENST00000474939 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
PRKAB2-202ENST00000474939 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
PRKAB2-202ENST00000474939 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
PRKAB2-202ENST00000474939 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
PRKAB2-202ENST00000474939 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
PRKAB2-202ENST00000474939 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
PRKAB2-202ENST00000474939 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
PRKAB2-202ENST00000474939 NUP160Q12769 1436 aa19.88■□□□□ 0.77
PRKAB2-202ENST00000474939 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
PRKAB2-202ENST00000474939 KIF13AQ9H1H9 1805 aa19.87■□□□□ 0.77
PRKAB2-202ENST00000474939 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
PRKAB2-202ENST00000474939 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
PRKAB2-202ENST00000474939 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.76
PRKAB2-202ENST00000474939 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
PRKAB2-202ENST00000474939 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
PRKAB2-202ENST00000474939 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms