RNA–Protein interactions for RNA: ENST00000470573.5

KDM5B-206, Transcript of lysine demethylase 5B, humanhuman

TSL 4

Gene KDM5B, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-206ENST00000470573 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
KDM5B-206ENST00000470573 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
KDM5B-206ENST00000470573 ABCC9O60706 1549 aa16.35■□□□□ 0.21
KDM5B-206ENST00000470573 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
KDM5B-206ENST00000470573 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
KDM5B-206ENST00000470573 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
KDM5B-206ENST00000470573 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
KDM5B-206ENST00000470573 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
KDM5B-206ENST00000470573 NACADO15069 1562 aa15.27■□□□□ 0.03
KDM5B-206ENST00000470573 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
KDM5B-206ENST00000470573 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
KDM5B-206ENST00000470573 BICRAQ9NZM4 1560 aa15.03■□□□□ -0
KDM5B-206ENST00000470573 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
KDM5B-206ENST00000470573 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
KDM5B-206ENST00000470573 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
KDM5B-206ENST00000470573 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
KDM5B-206ENST00000470573 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
KDM5B-206ENST00000470573 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
KDM5B-206ENST00000470573 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
KDM5B-206ENST00000470573 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
KDM5B-206ENST00000470573 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
KDM5B-206ENST00000470573 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
KDM5B-206ENST00000470573 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
KDM5B-206ENST00000470573 CUX2O14529 1486 aa14.11□□□□□ -0.15
KDM5B-206ENST00000470573 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
KDM5B-206ENST00000470573 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
KDM5B-206ENST00000470573 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
KDM5B-206ENST00000470573 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
KDM5B-206ENST00000470573 NESP48681 1621 aa14□□□□□ -0.17
KDM5B-206ENST00000470573 SMARCA2P51531 1590 aa14□□□□□ -0.17
KDM5B-206ENST00000470573 HMGXB3Q12766 1538 aa14□□□□□ -0.17
KDM5B-206ENST00000470573 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
KDM5B-206ENST00000470573 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
KDM5B-206ENST00000470573 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
KDM5B-206ENST00000470573 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
KDM5B-206ENST00000470573 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
KDM5B-206ENST00000470573 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.19
KDM5B-206ENST00000470573 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
KDM5B-206ENST00000470573 WIZO95785 1651 aa13.7□□□□□ -0.22
KDM5B-206ENST00000470573 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
KDM5B-206ENST00000470573 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
KDM5B-206ENST00000470573 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
KDM5B-206ENST00000470573 WDR62O43379 1518 aa13.64□□□□□ -0.23
KDM5B-206ENST00000470573 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.23
KDM5B-206ENST00000470573 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
KDM5B-206ENST00000470573 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
KDM5B-206ENST00000470573 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
KDM5B-206ENST00000470573 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
KDM5B-206ENST00000470573 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
KDM5B-206ENST00000470573 CFTRP13569 1480 aa13.42□□□□□ -0.26
KDM5B-206ENST00000470573 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
KDM5B-206ENST00000470573 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
KDM5B-206ENST00000470573 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
KDM5B-206ENST00000470573 FOXD1Q16676 465 aa13.38□□□□□ -0.27
KDM5B-206ENST00000470573 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
KDM5B-206ENST00000470573 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
KDM5B-206ENST00000470573 CHD1O14646 1710 aa13.35□□□□□ -0.27
KDM5B-206ENST00000470573 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
KDM5B-206ENST00000470573 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
KDM5B-206ENST00000470573 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
KDM5B-206ENST00000470573 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
KDM5B-206ENST00000470573 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
KDM5B-206ENST00000470573 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
KDM5B-206ENST00000470573 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
KDM5B-206ENST00000470573 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
KDM5B-206ENST00000470573 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
KDM5B-206ENST00000470573 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
KDM5B-206ENST00000470573 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 8.8
KDM5B-206ENST00000470573 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
KDM5B-206ENST00000470573 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
KDM5B-206ENST00000470573 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
KDM5B-206ENST00000470573 FBLN2P98095 1184 aa13.08□□□□□ -0.32
KDM5B-206ENST00000470573 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
KDM5B-206ENST00000470573 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
KDM5B-206ENST00000470573 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
KDM5B-206ENST00000470573 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
KDM5B-206ENST00000470573 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
KDM5B-206ENST00000470573 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
KDM5B-206ENST00000470573 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
KDM5B-206ENST00000470573 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
KDM5B-206ENST00000470573 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
KDM5B-206ENST00000470573 SOGA1O94964 1423 aa12.98□□□□□ -0.33
KDM5B-206ENST00000470573 CUX1P39880 1505 aa12.98□□□□□ -0.33
KDM5B-206ENST00000470573 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
KDM5B-206ENST00000470573 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
KDM5B-206ENST00000470573 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
KDM5B-206ENST00000470573 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
KDM5B-206ENST00000470573 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
KDM5B-206ENST00000470573 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
KDM5B-206ENST00000470573 ERCC6L2Q5T890 1561 aa12.85□□□□□ -0.35
KDM5B-206ENST00000470573 KIF13AQ9H1H9 1805 aa12.84□□□□□ -0.35
KDM5B-206ENST00000470573 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
KDM5B-206ENST00000470573 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
KDM5B-206ENST00000470573 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
KDM5B-206ENST00000470573 BIVM-ERCC5R4GMW8 1640 aa12.78□□□□□ -0.36
KDM5B-206ENST00000470573 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
KDM5B-206ENST00000470573 SHROOM2Q13796 1616 aa12.77□□□□□ -0.37
KDM5B-206ENST00000470573 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
KDM5B-206ENST00000470573 TSPOAP1O95153 1857 aa12.72□□□□□ -0.37
KDM5B-206ENST00000470573 NUP160Q12769 1436 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms