RNA–Protein interactions for RNA: ENST00000468518.1

LAMB1-206, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-206ENST00000468518 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
LAMB1-206ENST00000468518 ABCC9O60706 1549 aa29.26■■■□□ 2.27
LAMB1-206ENST00000468518 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
LAMB1-206ENST00000468518 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
LAMB1-206ENST00000468518 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
LAMB1-206ENST00000468518 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
LAMB1-206ENST00000468518 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
LAMB1-206ENST00000468518 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
LAMB1-206ENST00000468518 NACADO15069 1562 aa26.88■■□□□ 1.89
LAMB1-206ENST00000468518 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
LAMB1-206ENST00000468518 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
LAMB1-206ENST00000468518 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
LAMB1-206ENST00000468518 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
LAMB1-206ENST00000468518 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
LAMB1-206ENST00000468518 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
LAMB1-206ENST00000468518 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
LAMB1-206ENST00000468518 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
LAMB1-206ENST00000468518 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
LAMB1-206ENST00000468518 CUX2O14529 1486 aa25.67■■□□□ 1.7
LAMB1-206ENST00000468518 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
LAMB1-206ENST00000468518 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
LAMB1-206ENST00000468518 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
LAMB1-206ENST00000468518 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
LAMB1-206ENST00000468518 NESP48681 1621 aa24.86■■□□□ 1.57
LAMB1-206ENST00000468518 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
LAMB1-206ENST00000468518 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
LAMB1-206ENST00000468518 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
LAMB1-206ENST00000468518 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
LAMB1-206ENST00000468518 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
LAMB1-206ENST00000468518 BAZ1AQ9NRL2 1556 aaPredicted RBP24.48■■□□□ 1.51
LAMB1-206ENST00000468518 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
LAMB1-206ENST00000468518 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
LAMB1-206ENST00000468518 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
LAMB1-206ENST00000468518 WDR62O43379 1518 aa24.25■■□□□ 1.47
LAMB1-206ENST00000468518 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
LAMB1-206ENST00000468518 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
LAMB1-206ENST00000468518 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
LAMB1-206ENST00000468518 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
LAMB1-206ENST00000468518 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
LAMB1-206ENST00000468518 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
LAMB1-206ENST00000468518 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
LAMB1-206ENST00000468518 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
LAMB1-206ENST00000468518 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
LAMB1-206ENST00000468518 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
LAMB1-206ENST00000468518 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
LAMB1-206ENST00000468518 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
LAMB1-206ENST00000468518 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
LAMB1-206ENST00000468518 TRHP20396 242 aaPredicted RBP23.78■■□□□ 1.4
LAMB1-206ENST00000468518 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
LAMB1-206ENST00000468518 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
LAMB1-206ENST00000468518 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
LAMB1-206ENST00000468518 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
LAMB1-206ENST00000468518 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
LAMB1-206ENST00000468518 CHD1O14646 1710 aa23.56■■□□□ 1.36
LAMB1-206ENST00000468518 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
LAMB1-206ENST00000468518 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
LAMB1-206ENST00000468518 WIZO95785 1651 aa23.5■■□□□ 1.35
LAMB1-206ENST00000468518 CFTRP13569 1480 aa23.47■■□□□ 1.35
LAMB1-206ENST00000468518 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
LAMB1-206ENST00000468518 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
LAMB1-206ENST00000468518 PRDM2Q13029 1718 aa23.41■■□□□ 1.34
LAMB1-206ENST00000468518 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
LAMB1-206ENST00000468518 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
LAMB1-206ENST00000468518 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
LAMB1-206ENST00000468518 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
LAMB1-206ENST00000468518 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
LAMB1-206ENST00000468518 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
LAMB1-206ENST00000468518 FBLN2P98095 1184 aa23.08■■□□□ 1.29
LAMB1-206ENST00000468518 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
LAMB1-206ENST00000468518 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
LAMB1-206ENST00000468518 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
LAMB1-206ENST00000468518 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
LAMB1-206ENST00000468518 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
LAMB1-206ENST00000468518 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
LAMB1-206ENST00000468518 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
LAMB1-206ENST00000468518 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
LAMB1-206ENST00000468518 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
LAMB1-206ENST00000468518 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
LAMB1-206ENST00000468518 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
LAMB1-206ENST00000468518 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
LAMB1-206ENST00000468518 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
LAMB1-206ENST00000468518 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
LAMB1-206ENST00000468518 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
LAMB1-206ENST00000468518 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
LAMB1-206ENST00000468518 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
LAMB1-206ENST00000468518 SOGA1O94964 1423 aa22.64■■□□□ 1.21
LAMB1-206ENST00000468518 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
LAMB1-206ENST00000468518 EEA1Q15075 1411 aa22.57■■□□□ 1.2
LAMB1-206ENST00000468518 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
LAMB1-206ENST00000468518 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
LAMB1-206ENST00000468518 KDM6BO15054 1643 aa22.53■■□□□ 1.2
LAMB1-206ENST00000468518 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
LAMB1-206ENST00000468518 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
LAMB1-206ENST00000468518 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
LAMB1-206ENST00000468518 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
LAMB1-206ENST00000468518 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
LAMB1-206ENST00000468518 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
LAMB1-206ENST00000468518 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
LAMB1-206ENST00000468518 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
LAMB1-206ENST00000468518 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms