RNA–Protein interactions for RNA: ENST00000468475.1

POLR1B-211, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-211ENST00000468475 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
POLR1B-211ENST00000468475 ABCC9O60706 1549 aa17.73■□□□□ 0.43
POLR1B-211ENST00000468475 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
POLR1B-211ENST00000468475 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
POLR1B-211ENST00000468475 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
POLR1B-211ENST00000468475 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
POLR1B-211ENST00000468475 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
POLR1B-211ENST00000468475 NACADO15069 1562 aa16.38■□□□□ 0.21
POLR1B-211ENST00000468475 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR1B-211ENST00000468475 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
POLR1B-211ENST00000468475 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
POLR1B-211ENST00000468475 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
POLR1B-211ENST00000468475 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
POLR1B-211ENST00000468475 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
POLR1B-211ENST00000468475 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
POLR1B-211ENST00000468475 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
POLR1B-211ENST00000468475 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
POLR1B-211ENST00000468475 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.13
POLR1B-211ENST00000468475 CUX2O14529 1486 aa15.61■□□□□ 0.09
POLR1B-211ENST00000468475 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
POLR1B-211ENST00000468475 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
POLR1B-211ENST00000468475 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
POLR1B-211ENST00000468475 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
POLR1B-211ENST00000468475 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
POLR1B-211ENST00000468475 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
POLR1B-211ENST00000468475 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
POLR1B-211ENST00000468475 NESP48681 1621 aa15.05■□□□□ -0
POLR1B-211ENST00000468475 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
POLR1B-211ENST00000468475 HMGXB3Q12766 1538 aa14.96□□□□□ -0.02
POLR1B-211ENST00000468475 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
POLR1B-211ENST00000468475 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
POLR1B-211ENST00000468475 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
POLR1B-211ENST00000468475 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
POLR1B-211ENST00000468475 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
POLR1B-211ENST00000468475 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
POLR1B-211ENST00000468475 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
POLR1B-211ENST00000468475 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
POLR1B-211ENST00000468475 WDR62O43379 1518 aa14.72□□□□□ -0.05
POLR1B-211ENST00000468475 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
POLR1B-211ENST00000468475 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
POLR1B-211ENST00000468475 RIMBP3CA6NJZ7 1639 aa14.65□□□□□ -0.06
POLR1B-211ENST00000468475 RIMBP3BA6NNM3 1639 aa14.65□□□□□ -0.06
POLR1B-211ENST00000468475 RIMBP3Q9UFD9 1639 aa14.65□□□□□ -0.06
POLR1B-211ENST00000468475 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
POLR1B-211ENST00000468475 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
POLR1B-211ENST00000468475 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
POLR1B-211ENST00000468475 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
POLR1B-211ENST00000468475 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
POLR1B-211ENST00000468475 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
POLR1B-211ENST00000468475 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
POLR1B-211ENST00000468475 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
POLR1B-211ENST00000468475 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
POLR1B-211ENST00000468475 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
POLR1B-211ENST00000468475 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
POLR1B-211ENST00000468475 CFTRP13569 1480 aa14.32□□□□□ -0.12
POLR1B-211ENST00000468475 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
POLR1B-211ENST00000468475 IFT140Q96RY7 1462 aa14.27□□□□□ -0.12
POLR1B-211ENST00000468475 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
POLR1B-211ENST00000468475 WIZO95785 1651 aa14.25□□□□□ -0.13
POLR1B-211ENST00000468475 CHD1O14646 1710 aa14.23□□□□□ -0.13
POLR1B-211ENST00000468475 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
POLR1B-211ENST00000468475 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
POLR1B-211ENST00000468475 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
POLR1B-211ENST00000468475 FBLN2P98095 1184 aa14.09□□□□□ -0.15
POLR1B-211ENST00000468475 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
POLR1B-211ENST00000468475 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.164e-6■■■■■ 31
POLR1B-211ENST00000468475 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
POLR1B-211ENST00000468475 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
POLR1B-211ENST00000468475 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
POLR1B-211ENST00000468475 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
POLR1B-211ENST00000468475 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
POLR1B-211ENST00000468475 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
POLR1B-211ENST00000468475 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
POLR1B-211ENST00000468475 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-211ENST00000468475 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
POLR1B-211ENST00000468475 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-211ENST00000468475 WDR97A6NE52 1622 aa13.9□□□□□ -0.19
POLR1B-211ENST00000468475 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
POLR1B-211ENST00000468475 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
POLR1B-211ENST00000468475 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
POLR1B-211ENST00000468475 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
POLR1B-211ENST00000468475 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
POLR1B-211ENST00000468475 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
POLR1B-211ENST00000468475 SOGA1O94964 1423 aa13.83□□□□□ -0.2
POLR1B-211ENST00000468475 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
POLR1B-211ENST00000468475 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
POLR1B-211ENST00000468475 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
POLR1B-211ENST00000468475 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
POLR1B-211ENST00000468475 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
POLR1B-211ENST00000468475 CEP170Q5SW79 1584 aa13.68□□□□□ -0.22
POLR1B-211ENST00000468475 KDM6BO15054 1643 aa13.65□□□□□ -0.22
POLR1B-211ENST00000468475 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
POLR1B-211ENST00000468475 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
POLR1B-211ENST00000468475 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
POLR1B-211ENST00000468475 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
POLR1B-211ENST00000468475 CUX1P39880 1505 aa13.61□□□□□ -0.23
POLR1B-211ENST00000468475 NUP160Q12769 1436 aa13.61□□□□□ -0.23
POLR1B-211ENST00000468475 DIP2BQ9P265 1576 aa13.6□□□□□ -0.23
POLR1B-211ENST00000468475 ABCA5Q8WWZ7 1642 aa13.6□□□□□ -0.23
POLR1B-211ENST00000468475 MAPKBP1O60336 1514 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms