RNA–Protein interactions for RNA: ENST00000468316.1

PRKRIP1-203, Transcript of PRKR interacting protein 1, humanhuman

TSL 1 (best)

Gene PRKRIP1, Length 2,045 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRIP1-203ENST00000468316 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
PRKRIP1-203ENST00000468316 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
PRKRIP1-203ENST00000468316 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
PRKRIP1-203ENST00000468316 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PRKRIP1-203ENST00000468316 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
PRKRIP1-203ENST00000468316 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
PRKRIP1-203ENST00000468316 ABCC9O60706 1549 aa28.88■■■□□ 2.21
PRKRIP1-203ENST00000468316 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
PRKRIP1-203ENST00000468316 NACADO15069 1562 aa28.58■■■□□ 2.17
PRKRIP1-203ENST00000468316 SCRIBQ14160 1630 aa28.31■■■□□ 2.12
PRKRIP1-203ENST00000468316 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
PRKRIP1-203ENST00000468316 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
PRKRIP1-203ENST00000468316 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
PRKRIP1-203ENST00000468316 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
PRKRIP1-203ENST00000468316 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
PRKRIP1-203ENST00000468316 BICRAQ9NZM4 1560 aa27.44■■□□□ 1.98
PRKRIP1-203ENST00000468316 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
PRKRIP1-203ENST00000468316 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
PRKRIP1-203ENST00000468316 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.961e-6■■■■□ 20.2
PRKRIP1-203ENST00000468316 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
PRKRIP1-203ENST00000468316 WIZO95785 1651 aa27.15■■□□□ 1.94
PRKRIP1-203ENST00000468316 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
PRKRIP1-203ENST00000468316 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
PRKRIP1-203ENST00000468316 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
PRKRIP1-203ENST00000468316 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
PRKRIP1-203ENST00000468316 SMARCA2P51531 1590 aa26.64■■□□□ 1.85
PRKRIP1-203ENST00000468316 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
PRKRIP1-203ENST00000468316 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
PRKRIP1-203ENST00000468316 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
PRKRIP1-203ENST00000468316 NCAPD3P42695 1498 aa26.39■■□□□ 1.81
PRKRIP1-203ENST00000468316 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
PRKRIP1-203ENST00000468316 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
PRKRIP1-203ENST00000468316 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
PRKRIP1-203ENST00000468316 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
PRKRIP1-203ENST00000468316 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
PRKRIP1-203ENST00000468316 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
PRKRIP1-203ENST00000468316 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
PRKRIP1-203ENST00000468316 CFTRP13569 1480 aa25.86■■□□□ 1.73
PRKRIP1-203ENST00000468316 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
PRKRIP1-203ENST00000468316 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
PRKRIP1-203ENST00000468316 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
PRKRIP1-203ENST00000468316 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
PRKRIP1-203ENST00000468316 SOGA1O94964 1423 aa25.67■■□□□ 1.7
PRKRIP1-203ENST00000468316 EEA1Q15075 1411 aa25.66■■□□□ 1.7
PRKRIP1-203ENST00000468316 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
PRKRIP1-203ENST00000468316 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
PRKRIP1-203ENST00000468316 CUX1P39880 1505 aa25.56■■□□□ 1.68
PRKRIP1-203ENST00000468316 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
PRKRIP1-203ENST00000468316 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
PRKRIP1-203ENST00000468316 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
PRKRIP1-203ENST00000468316 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
PRKRIP1-203ENST00000468316 NESP48681 1621 aa25.43■■□□□ 1.66
PRKRIP1-203ENST00000468316 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
PRKRIP1-203ENST00000468316 KIF21BO75037 1637 aa25.31■■□□□ 1.64
PRKRIP1-203ENST00000468316 GOLGA3Q08378 1498 aa25.31■■□□□ 1.64
PRKRIP1-203ENST00000468316 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
PRKRIP1-203ENST00000468316 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
PRKRIP1-203ENST00000468316 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
PRKRIP1-203ENST00000468316 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
PRKRIP1-203ENST00000468316 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
PRKRIP1-203ENST00000468316 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
PRKRIP1-203ENST00000468316 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
PRKRIP1-203ENST00000468316 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
PRKRIP1-203ENST00000468316 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
PRKRIP1-203ENST00000468316 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
PRKRIP1-203ENST00000468316 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
PRKRIP1-203ENST00000468316 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 CUX2O14529 1486 aa25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
PRKRIP1-203ENST00000468316 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
PRKRIP1-203ENST00000468316 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
PRKRIP1-203ENST00000468316 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
PRKRIP1-203ENST00000468316 IGF1RP08069 1367 aa25■■□□□ 1.59
PRKRIP1-203ENST00000468316 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
PRKRIP1-203ENST00000468316 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.58
PRKRIP1-203ENST00000468316 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
PRKRIP1-203ENST00000468316 CLIP1P30622 1438 aa24.92■■□□□ 1.58
PRKRIP1-203ENST00000468316 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
PRKRIP1-203ENST00000468316 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
PRKRIP1-203ENST00000468316 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
PRKRIP1-203ENST00000468316 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
PRKRIP1-203ENST00000468316 CUL7Q14999 1698 aa24.77■■□□□ 1.56
PRKRIP1-203ENST00000468316 WDR62O43379 1518 aa24.76■■□□□ 1.55
PRKRIP1-203ENST00000468316 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
PRKRIP1-203ENST00000468316 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
PRKRIP1-203ENST00000468316 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
PRKRIP1-203ENST00000468316 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
PRKRIP1-203ENST00000468316 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
PRKRIP1-203ENST00000468316 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
PRKRIP1-203ENST00000468316 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
PRKRIP1-203ENST00000468316 THOC2Q8NI27 1593 aaKnown RBP24.64■■□□□ 1.54
PRKRIP1-203ENST00000468316 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
PRKRIP1-203ENST00000468316 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
PRKRIP1-203ENST00000468316 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PRKRIP1-203ENST00000468316 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.521e-9■■■■■ 28.1
PRKRIP1-203ENST00000468316 CTTNBP2Q8WZ74 1663 aa24.54■■□□□ 1.52
PRKRIP1-203ENST00000468316 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
PRKRIP1-203ENST00000468316 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
PRKRIP1-203ENST00000468316 APLP2Q06481 763 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms