RNA–Protein interactions for RNA: ENST00000467166.1

CDK6-203, Transcript of cyclin dependent kinase 6, humanhuman

TSL 2

Gene CDK6, Length 779 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-203ENST00000467166 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.4
CDK6-203ENST00000467166 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
CDK6-203ENST00000467166 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
CDK6-203ENST00000467166 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
CDK6-203ENST00000467166 ABCC9O60706 1549 aa15.72■□□□□ 0.11
CDK6-203ENST00000467166 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
CDK6-203ENST00000467166 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
CDK6-203ENST00000467166 NACADO15069 1562 aa14.82□□□□□ -0.04
CDK6-203ENST00000467166 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
CDK6-203ENST00000467166 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
CDK6-203ENST00000467166 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
CDK6-203ENST00000467166 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
CDK6-203ENST00000467166 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDK6-203ENST00000467166 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
CDK6-203ENST00000467166 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
CDK6-203ENST00000467166 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
CDK6-203ENST00000467166 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
CDK6-203ENST00000467166 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
CDK6-203ENST00000467166 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
CDK6-203ENST00000467166 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
CDK6-203ENST00000467166 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
CDK6-203ENST00000467166 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
CDK6-203ENST00000467166 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
CDK6-203ENST00000467166 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
CDK6-203ENST00000467166 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
CDK6-203ENST00000467166 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
CDK6-203ENST00000467166 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
CDK6-203ENST00000467166 SMARCA2P51531 1590 aa13.58□□□□□ -0.23
CDK6-203ENST00000467166 CUX2O14529 1486 aa13.58□□□□□ -0.24
CDK6-203ENST00000467166 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
CDK6-203ENST00000467166 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
CDK6-203ENST00000467166 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
CDK6-203ENST00000467166 NESP48681 1621 aa13.51□□□□□ -0.25
CDK6-203ENST00000467166 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
CDK6-203ENST00000467166 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
CDK6-203ENST00000467166 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
CDK6-203ENST00000467166 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
CDK6-203ENST00000467166 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
CDK6-203ENST00000467166 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
CDK6-203ENST00000467166 WIZO95785 1651 aa13.36□□□□□ -0.27
CDK6-203ENST00000467166 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
CDK6-203ENST00000467166 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
CDK6-203ENST00000467166 WDR62O43379 1518 aa13.2□□□□□ -0.3
CDK6-203ENST00000467166 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
CDK6-203ENST00000467166 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
CDK6-203ENST00000467166 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
CDK6-203ENST00000467166 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
CDK6-203ENST00000467166 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
CDK6-203ENST00000467166 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
CDK6-203ENST00000467166 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
CDK6-203ENST00000467166 CFTRP13569 1480 aa13.09□□□□□ -0.31
CDK6-203ENST00000467166 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
CDK6-203ENST00000467166 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
CDK6-203ENST00000467166 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
CDK6-203ENST00000467166 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
CDK6-203ENST00000467166 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
CDK6-203ENST00000467166 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
CDK6-203ENST00000467166 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
CDK6-203ENST00000467166 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
CDK6-203ENST00000467166 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
CDK6-203ENST00000467166 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
CDK6-203ENST00000467166 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
CDK6-203ENST00000467166 FOXD1Q16676 465 aa12.83□□□□□ -0.36
CDK6-203ENST00000467166 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
CDK6-203ENST00000467166 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
CDK6-203ENST00000467166 CHD1O14646 1710 aa12.79□□□□□ -0.36
CDK6-203ENST00000467166 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
CDK6-203ENST00000467166 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
CDK6-203ENST00000467166 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
CDK6-203ENST00000467166 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.373e-8■■■□□ 17.1
CDK6-203ENST00000467166 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
CDK6-203ENST00000467166 SOGA1O94964 1423 aa12.69□□□□□ -0.38
CDK6-203ENST00000467166 CUX1P39880 1505 aa12.68□□□□□ -0.38
CDK6-203ENST00000467166 WDR97A6NE52 1622 aa12.65□□□□□ -0.38
CDK6-203ENST00000467166 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
CDK6-203ENST00000467166 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
CDK6-203ENST00000467166 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
CDK6-203ENST00000467166 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
CDK6-203ENST00000467166 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
CDK6-203ENST00000467166 CLASP1Q7Z460 1538 aa12.6□□□□□ -0.39
CDK6-203ENST00000467166 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
CDK6-203ENST00000467166 CYB5RLQ6IPT4 315 aa12.58□□□□□ -0.4
CDK6-203ENST00000467166 FBLN2P98095 1184 aa12.57□□□□□ -0.4
CDK6-203ENST00000467166 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
CDK6-203ENST00000467166 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
CDK6-203ENST00000467166 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
CDK6-203ENST00000467166 ABCA5Q8WWZ7 1642 aa12.53□□□□□ -0.4
CDK6-203ENST00000467166 SYNJ2O15056 1496 aa12.52□□□□□ -0.41
CDK6-203ENST00000467166 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
CDK6-203ENST00000467166 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
CDK6-203ENST00000467166 GAPVD1Q14C86 1478 aa12.49□□□□□ -0.41
CDK6-203ENST00000467166 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
CDK6-203ENST00000467166 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
CDK6-203ENST00000467166 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
CDK6-203ENST00000467166 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
CDK6-203ENST00000467166 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
CDK6-203ENST00000467166 CEP170Q5SW79 1584 aa12.4□□□□□ -0.42
CDK6-203ENST00000467166 IGF1RP08069 1367 aa12.4□□□□□ -0.42
CDK6-203ENST00000467166 GRIN2AQ12879 1464 aa12.4□□□□□ -0.43
CDK6-203ENST00000467166 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms