RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
SOX2-OT-203ENST00000466034 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
SOX2-OT-203ENST00000466034 ABCC9O60706 1549 aa27.81■■■□□ 2.04
SOX2-OT-203ENST00000466034 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
SOX2-OT-203ENST00000466034 NACADO15069 1562 aa26.45■■□□□ 1.82
SOX2-OT-203ENST00000466034 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
SOX2-OT-203ENST00000466034 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
SOX2-OT-203ENST00000466034 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SOX2-OT-203ENST00000466034 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
SOX2-OT-203ENST00000466034 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
SOX2-OT-203ENST00000466034 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
SOX2-OT-203ENST00000466034 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
SOX2-OT-203ENST00000466034 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
SOX2-OT-203ENST00000466034 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
SOX2-OT-203ENST00000466034 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
SOX2-OT-203ENST00000466034 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
SOX2-OT-203ENST00000466034 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
SOX2-OT-203ENST00000466034 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
SOX2-OT-203ENST00000466034 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
SOX2-OT-203ENST00000466034 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
SOX2-OT-203ENST00000466034 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
SOX2-OT-203ENST00000466034 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
SOX2-OT-203ENST00000466034 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
SOX2-OT-203ENST00000466034 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
SOX2-OT-203ENST00000466034 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
SOX2-OT-203ENST00000466034 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SOX2-OT-203ENST00000466034 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
SOX2-OT-203ENST00000466034 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
SOX2-OT-203ENST00000466034 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
SOX2-OT-203ENST00000466034 CUX2O14529 1486 aa24.01■■□□□ 1.43
SOX2-OT-203ENST00000466034 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
SOX2-OT-203ENST00000466034 NESP48681 1621 aa23.92■■□□□ 1.42
SOX2-OT-203ENST00000466034 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
SOX2-OT-203ENST00000466034 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.41
SOX2-OT-203ENST00000466034 WIZO95785 1651 aa23.73■■□□□ 1.39
SOX2-OT-203ENST00000466034 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
SOX2-OT-203ENST00000466034 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
SOX2-OT-203ENST00000466034 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
SOX2-OT-203ENST00000466034 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
SOX2-OT-203ENST00000466034 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
SOX2-OT-203ENST00000466034 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SOX2-OT-203ENST00000466034 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
SOX2-OT-203ENST00000466034 WDR62O43379 1518 aa23.43■■□□□ 1.34
SOX2-OT-203ENST00000466034 CFTRP13569 1480 aa23.42■■□□□ 1.34
SOX2-OT-203ENST00000466034 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
SOX2-OT-203ENST00000466034 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
SOX2-OT-203ENST00000466034 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
SOX2-OT-203ENST00000466034 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
SOX2-OT-203ENST00000466034 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
SOX2-OT-203ENST00000466034 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
SOX2-OT-203ENST00000466034 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
SOX2-OT-203ENST00000466034 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
SOX2-OT-203ENST00000466034 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
SOX2-OT-203ENST00000466034 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
SOX2-OT-203ENST00000466034 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
SOX2-OT-203ENST00000466034 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
SOX2-OT-203ENST00000466034 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
SOX2-OT-203ENST00000466034 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
SOX2-OT-203ENST00000466034 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
SOX2-OT-203ENST00000466034 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
SOX2-OT-203ENST00000466034 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
SOX2-OT-203ENST00000466034 SOGA1O94964 1423 aa22.6■■□□□ 1.21
SOX2-OT-203ENST00000466034 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
SOX2-OT-203ENST00000466034 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
SOX2-OT-203ENST00000466034 CUX1P39880 1505 aa22.58■■□□□ 1.21
SOX2-OT-203ENST00000466034 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
SOX2-OT-203ENST00000466034 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
SOX2-OT-203ENST00000466034 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
SOX2-OT-203ENST00000466034 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
SOX2-OT-203ENST00000466034 CHD1O14646 1710 aa22.55■■□□□ 1.2
SOX2-OT-203ENST00000466034 ARHGEF11O15085 1522 aa22.52■■□□□ 1.2
SOX2-OT-203ENST00000466034 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
SOX2-OT-203ENST00000466034 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
SOX2-OT-203ENST00000466034 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
SOX2-OT-203ENST00000466034 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
SOX2-OT-203ENST00000466034 FBLN2P98095 1184 aa22.42■■□□□ 1.18
SOX2-OT-203ENST00000466034 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
SOX2-OT-203ENST00000466034 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
SOX2-OT-203ENST00000466034 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
SOX2-OT-203ENST00000466034 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
SOX2-OT-203ENST00000466034 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
SOX2-OT-203ENST00000466034 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SOX2-OT-203ENST00000466034 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
SOX2-OT-203ENST00000466034 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
SOX2-OT-203ENST00000466034 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
SOX2-OT-203ENST00000466034 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
SOX2-OT-203ENST00000466034 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
SOX2-OT-203ENST00000466034 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
SOX2-OT-203ENST00000466034 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
SOX2-OT-203ENST00000466034 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
SOX2-OT-203ENST00000466034 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
SOX2-OT-203ENST00000466034 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
SOX2-OT-203ENST00000466034 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
SOX2-OT-203ENST00000466034 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
SOX2-OT-203ENST00000466034 NUP160Q12769 1436 aa22.07■■□□□ 1.12
SOX2-OT-203ENST00000466034 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
SOX2-OT-203ENST00000466034 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
SOX2-OT-203ENST00000466034 SHROOM2Q13796 1616 aa21.97■■□□□ 1.11
SOX2-OT-203ENST00000466034 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
SOX2-OT-203ENST00000466034 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms