RNA–Protein interactions for RNA: ENST00000462224.5

PCP4-202, Transcript of Purkinje cell protein 4, humanhuman

TSL 2

Gene PCP4, Length 683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-202ENST00000462224 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
PCP4-202ENST00000462224 ABCC9O60706 1549 aa17.47■□□□□ 0.39
PCP4-202ENST00000462224 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
PCP4-202ENST00000462224 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
PCP4-202ENST00000462224 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
PCP4-202ENST00000462224 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
PCP4-202ENST00000462224 NACADO15069 1562 aa16.38■□□□□ 0.21
PCP4-202ENST00000462224 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
PCP4-202ENST00000462224 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCP4-202ENST00000462224 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PCP4-202ENST00000462224 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
PCP4-202ENST00000462224 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
PCP4-202ENST00000462224 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
PCP4-202ENST00000462224 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
PCP4-202ENST00000462224 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
PCP4-202ENST00000462224 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
PCP4-202ENST00000462224 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
PCP4-202ENST00000462224 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
PCP4-202ENST00000462224 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
PCP4-202ENST00000462224 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
PCP4-202ENST00000462224 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
PCP4-202ENST00000462224 CUX2O14529 1486 aa15.27■□□□□ 0.03
PCP4-202ENST00000462224 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
PCP4-202ENST00000462224 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
PCP4-202ENST00000462224 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
PCP4-202ENST00000462224 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
PCP4-202ENST00000462224 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
PCP4-202ENST00000462224 NESP48681 1621 aa14.9□□□□□ -0.02
PCP4-202ENST00000462224 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
PCP4-202ENST00000462224 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.03
PCP4-202ENST00000462224 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
PCP4-202ENST00000462224 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
PCP4-202ENST00000462224 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
PCP4-202ENST00000462224 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
PCP4-202ENST00000462224 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.04
PCP4-202ENST00000462224 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
PCP4-202ENST00000462224 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
PCP4-202ENST00000462224 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
PCP4-202ENST00000462224 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
PCP4-202ENST00000462224 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
PCP4-202ENST00000462224 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
PCP4-202ENST00000462224 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
PCP4-202ENST00000462224 WDR62O43379 1518 aa14.56□□□□□ -0.08
PCP4-202ENST00000462224 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
PCP4-202ENST00000462224 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
PCP4-202ENST00000462224 CFTRP13569 1480 aa14.41□□□□□ -0.1
PCP4-202ENST00000462224 WIZO95785 1651 aa14.41□□□□□ -0.1
PCP4-202ENST00000462224 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
PCP4-202ENST00000462224 URB2Q14146 1524 aaKnown RBP14.32□□□□□ -0.12
PCP4-202ENST00000462224 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
PCP4-202ENST00000462224 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
PCP4-202ENST00000462224 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
PCP4-202ENST00000462224 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
PCP4-202ENST00000462224 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
PCP4-202ENST00000462224 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
PCP4-202ENST00000462224 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
PCP4-202ENST00000462224 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
PCP4-202ENST00000462224 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
PCP4-202ENST00000462224 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
PCP4-202ENST00000462224 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
PCP4-202ENST00000462224 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
PCP4-202ENST00000462224 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
PCP4-202ENST00000462224 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
PCP4-202ENST00000462224 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
PCP4-202ENST00000462224 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
PCP4-202ENST00000462224 FBLN2P98095 1184 aa14.06□□□□□ -0.16
PCP4-202ENST00000462224 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCP4-202ENST00000462224 ARAP1Q96P48 1450 aa14.05□□□□□ -0.16
PCP4-202ENST00000462224 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
PCP4-202ENST00000462224 CHD1O14646 1710 aa14.02□□□□□ -0.16
PCP4-202ENST00000462224 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
PCP4-202ENST00000462224 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
PCP4-202ENST00000462224 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
PCP4-202ENST00000462224 SOGA1O94964 1423 aa13.95□□□□□ -0.18
PCP4-202ENST00000462224 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
PCP4-202ENST00000462224 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
PCP4-202ENST00000462224 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
PCP4-202ENST00000462224 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
PCP4-202ENST00000462224 CLASP1Q7Z460 1538 aa13.89□□□□□ -0.19
PCP4-202ENST00000462224 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
PCP4-202ENST00000462224 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
PCP4-202ENST00000462224 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
PCP4-202ENST00000462224 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
PCP4-202ENST00000462224 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
PCP4-202ENST00000462224 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
PCP4-202ENST00000462224 FOXD1Q16676 465 aa13.78□□□□□ -0.2
PCP4-202ENST00000462224 CUX1P39880 1505 aa13.74□□□□□ -0.21
PCP4-202ENST00000462224 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
PCP4-202ENST00000462224 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
PCP4-202ENST00000462224 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
PCP4-202ENST00000462224 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
PCP4-202ENST00000462224 NUP160Q12769 1436 aa13.63□□□□□ -0.23
PCP4-202ENST00000462224 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PCP4-202ENST00000462224 CEP170Q5SW79 1584 aa13.6□□□□□ -0.23
PCP4-202ENST00000462224 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
PCP4-202ENST00000462224 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
PCP4-202ENST00000462224 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCP4-202ENST00000462224 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
PCP4-202ENST00000462224 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
PCP4-202ENST00000462224 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 372.4 ms