RNA–Protein interactions for RNA: ENST00000461644.5

PLS1-204, Transcript of plastin 1, humanhuman

TSL 4

Gene PLS1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-204ENST00000461644 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
PLS1-204ENST00000461644 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
PLS1-204ENST00000461644 ABCC9O60706 1549 aa27.73■■■□□ 2.03
PLS1-204ENST00000461644 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
PLS1-204ENST00000461644 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
PLS1-204ENST00000461644 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
PLS1-204ENST00000461644 NACADO15069 1562 aa26.41■■□□□ 1.82
PLS1-204ENST00000461644 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
PLS1-204ENST00000461644 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
PLS1-204ENST00000461644 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
PLS1-204ENST00000461644 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
PLS1-204ENST00000461644 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
PLS1-204ENST00000461644 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
PLS1-204ENST00000461644 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
PLS1-204ENST00000461644 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
PLS1-204ENST00000461644 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
PLS1-204ENST00000461644 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
PLS1-204ENST00000461644 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
PLS1-204ENST00000461644 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
PLS1-204ENST00000461644 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
PLS1-204ENST00000461644 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
PLS1-204ENST00000461644 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
PLS1-204ENST00000461644 CUX2O14529 1486 aa24.28■■□□□ 1.48
PLS1-204ENST00000461644 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
PLS1-204ENST00000461644 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
PLS1-204ENST00000461644 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
PLS1-204ENST00000461644 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
PLS1-204ENST00000461644 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
PLS1-204ENST00000461644 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
PLS1-204ENST00000461644 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
PLS1-204ENST00000461644 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
PLS1-204ENST00000461644 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
PLS1-204ENST00000461644 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
PLS1-204ENST00000461644 NESP48681 1621 aa23.77■■□□□ 1.4
PLS1-204ENST00000461644 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
PLS1-204ENST00000461644 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
PLS1-204ENST00000461644 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
PLS1-204ENST00000461644 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
PLS1-204ENST00000461644 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
PLS1-204ENST00000461644 WDR62O43379 1518 aa23.45■■□□□ 1.34
PLS1-204ENST00000461644 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
PLS1-204ENST00000461644 WIZO95785 1651 aa23.37■■□□□ 1.33
PLS1-204ENST00000461644 CEP164Q9UPV0 1460 aa23.27■■□□□ 1.32
PLS1-204ENST00000461644 CFTRP13569 1480 aa23.24■■□□□ 1.31
PLS1-204ENST00000461644 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
PLS1-204ENST00000461644 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
PLS1-204ENST00000461644 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
PLS1-204ENST00000461644 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
PLS1-204ENST00000461644 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
PLS1-204ENST00000461644 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
PLS1-204ENST00000461644 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
PLS1-204ENST00000461644 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
PLS1-204ENST00000461644 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
PLS1-204ENST00000461644 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
PLS1-204ENST00000461644 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
PLS1-204ENST00000461644 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
PLS1-204ENST00000461644 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
PLS1-204ENST00000461644 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
PLS1-204ENST00000461644 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
PLS1-204ENST00000461644 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
PLS1-204ENST00000461644 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
PLS1-204ENST00000461644 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
PLS1-204ENST00000461644 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
PLS1-204ENST00000461644 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
PLS1-204ENST00000461644 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
PLS1-204ENST00000461644 CHD1O14646 1710 aa22.59■■□□□ 1.21
PLS1-204ENST00000461644 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
PLS1-204ENST00000461644 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
PLS1-204ENST00000461644 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
PLS1-204ENST00000461644 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
PLS1-204ENST00000461644 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
PLS1-204ENST00000461644 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
PLS1-204ENST00000461644 SOGA1O94964 1423 aa22.32■■□□□ 1.16
PLS1-204ENST00000461644 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
PLS1-204ENST00000461644 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
PLS1-204ENST00000461644 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PLS1-204ENST00000461644 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
PLS1-204ENST00000461644 CUX1P39880 1505 aa22.25■■□□□ 1.15
PLS1-204ENST00000461644 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
PLS1-204ENST00000461644 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
PLS1-204ENST00000461644 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
PLS1-204ENST00000461644 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
PLS1-204ENST00000461644 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
PLS1-204ENST00000461644 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
PLS1-204ENST00000461644 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
PLS1-204ENST00000461644 FBLN2P98095 1184 aa22.13■■□□□ 1.13
PLS1-204ENST00000461644 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
PLS1-204ENST00000461644 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
PLS1-204ENST00000461644 TRHP20396 242 aaPredicted RBP22.01■■□□□ 1.11
PLS1-204ENST00000461644 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
PLS1-204ENST00000461644 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
PLS1-204ENST00000461644 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
PLS1-204ENST00000461644 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
PLS1-204ENST00000461644 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
PLS1-204ENST00000461644 NUP160Q12769 1436 aa21.94■■□□□ 1.1
PLS1-204ENST00000461644 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
PLS1-204ENST00000461644 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
PLS1-204ENST00000461644 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
PLS1-204ENST00000461644 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
PLS1-204ENST00000461644 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms