RNA–Protein interactions for RNA: ENST00000461628.5

TFAP2A-204, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-204ENST00000461628 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
TFAP2A-204ENST00000461628 ABCC9O60706 1549 aa29.71■■■□□ 2.35
TFAP2A-204ENST00000461628 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
TFAP2A-204ENST00000461628 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
TFAP2A-204ENST00000461628 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
TFAP2A-204ENST00000461628 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
TFAP2A-204ENST00000461628 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
TFAP2A-204ENST00000461628 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
TFAP2A-204ENST00000461628 NACADO15069 1562 aa27.29■■□□□ 1.96
TFAP2A-204ENST00000461628 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
TFAP2A-204ENST00000461628 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
TFAP2A-204ENST00000461628 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
TFAP2A-204ENST00000461628 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
TFAP2A-204ENST00000461628 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
TFAP2A-204ENST00000461628 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
TFAP2A-204ENST00000461628 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
TFAP2A-204ENST00000461628 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
TFAP2A-204ENST00000461628 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
TFAP2A-204ENST00000461628 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
TFAP2A-204ENST00000461628 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
TFAP2A-204ENST00000461628 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
TFAP2A-204ENST00000461628 CUX2O14529 1486 aa25.83■■□□□ 1.73
TFAP2A-204ENST00000461628 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
TFAP2A-204ENST00000461628 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
TFAP2A-204ENST00000461628 NESP48681 1621 aa25.27■■□□□ 1.64
TFAP2A-204ENST00000461628 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
TFAP2A-204ENST00000461628 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
TFAP2A-204ENST00000461628 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
TFAP2A-204ENST00000461628 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
TFAP2A-204ENST00000461628 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
TFAP2A-204ENST00000461628 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
TFAP2A-204ENST00000461628 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
TFAP2A-204ENST00000461628 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
TFAP2A-204ENST00000461628 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
TFAP2A-204ENST00000461628 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
TFAP2A-204ENST00000461628 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
TFAP2A-204ENST00000461628 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.52
TFAP2A-204ENST00000461628 WDR62O43379 1518 aa24.54■■□□□ 1.52
TFAP2A-204ENST00000461628 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
TFAP2A-204ENST00000461628 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
TFAP2A-204ENST00000461628 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
TFAP2A-204ENST00000461628 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
TFAP2A-204ENST00000461628 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
TFAP2A-204ENST00000461628 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
TFAP2A-204ENST00000461628 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
TFAP2A-204ENST00000461628 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
TFAP2A-204ENST00000461628 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
TFAP2A-204ENST00000461628 ARHGEF11O15085 1522 aa24.2■■□□□ 1.46
TFAP2A-204ENST00000461628 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
TFAP2A-204ENST00000461628 TRHP20396 242 aaPredicted RBP24.16■■□□□ 1.46
TFAP2A-204ENST00000461628 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
TFAP2A-204ENST00000461628 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
TFAP2A-204ENST00000461628 WIZO95785 1651 aa24.08■■□□□ 1.44
TFAP2A-204ENST00000461628 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
TFAP2A-204ENST00000461628 CFTRP13569 1480 aa23.93■■□□□ 1.42
TFAP2A-204ENST00000461628 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
TFAP2A-204ENST00000461628 CHD1O14646 1710 aa23.86■■□□□ 1.41
TFAP2A-204ENST00000461628 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
TFAP2A-204ENST00000461628 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
TFAP2A-204ENST00000461628 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
TFAP2A-204ENST00000461628 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
TFAP2A-204ENST00000461628 FBLN2P98095 1184 aa23.7■■□□□ 1.38
TFAP2A-204ENST00000461628 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
TFAP2A-204ENST00000461628 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
TFAP2A-204ENST00000461628 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.37
TFAP2A-204ENST00000461628 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
TFAP2A-204ENST00000461628 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
TFAP2A-204ENST00000461628 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
TFAP2A-204ENST00000461628 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
TFAP2A-204ENST00000461628 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
TFAP2A-204ENST00000461628 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
TFAP2A-204ENST00000461628 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
TFAP2A-204ENST00000461628 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
TFAP2A-204ENST00000461628 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
TFAP2A-204ENST00000461628 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
TFAP2A-204ENST00000461628 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
TFAP2A-204ENST00000461628 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
TFAP2A-204ENST00000461628 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
TFAP2A-204ENST00000461628 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
TFAP2A-204ENST00000461628 SOGA1O94964 1423 aa23.19■■□□□ 1.3
TFAP2A-204ENST00000461628 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
TFAP2A-204ENST00000461628 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
TFAP2A-204ENST00000461628 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
TFAP2A-204ENST00000461628 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
TFAP2A-204ENST00000461628 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
TFAP2A-204ENST00000461628 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
TFAP2A-204ENST00000461628 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
TFAP2A-204ENST00000461628 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
TFAP2A-204ENST00000461628 CUX1P39880 1505 aa22.93■■□□□ 1.26
TFAP2A-204ENST00000461628 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
TFAP2A-204ENST00000461628 CEP170Q5SW79 1584 aa22.91■■□□□ 1.26
TFAP2A-204ENST00000461628 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
TFAP2A-204ENST00000461628 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
TFAP2A-204ENST00000461628 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
TFAP2A-204ENST00000461628 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
TFAP2A-204ENST00000461628 KDM6BO15054 1643 aa22.77■■□□□ 1.24
TFAP2A-204ENST00000461628 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
TFAP2A-204ENST00000461628 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
TFAP2A-204ENST00000461628 NUP160Q12769 1436 aa22.73■■□□□ 1.23
TFAP2A-204ENST00000461628 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms