RNA–Protein interactions for RNA: ENST00000460719.5

LIN9-204, Transcript of lin-9 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN9, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9-204ENST00000460719 AEBP2Q6ZN18 517 aaPredicted RBP11.26□□□□□ -0.61
LIN9-204ENST00000460719 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
LIN9-204ENST00000460719 NISCHQ9Y2I1 1504 aa10.41□□□□□ -0.74
LIN9-204ENST00000460719 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
LIN9-204ENST00000460719 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
LIN9-204ENST00000460719 CCDC180Q9P1Z9 1646 aa9.79□□□□□ -0.84
LIN9-204ENST00000460719 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
LIN9-204ENST00000460719 ABCC9O60706 1549 aa9.38□□□□□ -0.91
LIN9-204ENST00000460719 MSH5O43196 834 aa9.28□□□□□ -0.92
LIN9-204ENST00000460719 RB1CC1Q8TDY2 1594 aa9.25□□□□□ -0.93
LIN9-204ENST00000460719 FOXD1Q16676 465 aa9.22□□□□□ -0.93
LIN9-204ENST00000460719 NACADO15069 1562 aa9.19□□□□□ -0.94
LIN9-204ENST00000460719 SHROOM4Q9ULL8 1493 aa9.19□□□□□ -0.94
LIN9-204ENST00000460719 MYO15BQ96JP2 1530 aa9.19□□□□□ -0.94
LIN9-204ENST00000460719 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
LIN9-204ENST00000460719 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
LIN9-204ENST00000460719 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
LIN9-204ENST00000460719 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
LIN9-204ENST00000460719 CC2D2AQ9P2K1 1620 aa8.7□□□□□ -1.02
LIN9-204ENST00000460719 EIF4G1Q04637 1599 aaKnown RBP8.66□□□□□ -1.02
LIN9-204ENST00000460719 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
LIN9-204ENST00000460719 CUX2O14529 1486 aa8.63□□□□□ -1.03
LIN9-204ENST00000460719 ZCCHC6Q5VYS8 1495 aaKnown RBP8.63□□□□□ -1.03
LIN9-204ENST00000460719 DNAJC5Q9H3Z4 198 aa8.59□□□□□ -1.03
LIN9-204ENST00000460719 PABPN1Q86U42 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
LIN9-204ENST00000460719 PIAS4Q8N2W9 510 aaPredicted RBP8.45□□□□□ -1.06
LIN9-204ENST00000460719 HMGXB3Q12766 1538 aa8.41□□□□□ -1.06
LIN9-204ENST00000460719 SCRIBQ14160 1630 aa8.41□□□□□ -1.06
LIN9-204ENST00000460719 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
LIN9-204ENST00000460719 SMARCA2P51531 1590 aa8.37□□□□□ -1.07
LIN9-204ENST00000460719 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
LIN9-204ENST00000460719 THOC2Q8NI27 1593 aaKnown RBP8.31□□□□□ -1.08
LIN9-204ENST00000460719 LAMC3Q9Y6N6 1575 aa8.31□□□□□ -1.08
LIN9-204ENST00000460719 ERCC6Q03468 1493 aa8.22□□□□□ -1.09
LIN9-204ENST00000460719 SMARCA4P51532 1647 aa8.21□□□□□ -1.09
LIN9-204ENST00000460719 ATAD2BQ9ULI0 1458 aa8.2□□□□□ -1.1
LIN9-204ENST00000460719 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
LIN9-204ENST00000460719 WDR62O43379 1518 aa8.17□□□□□ -1.1
LIN9-204ENST00000460719 DCAF8L2P0C7V8 631 aa8.16□□□□□ -1.1
LIN9-204ENST00000460719 PDS5BQ9NTI5 1447 aa8.13□□□□□ -1.11
LIN9-204ENST00000460719 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
LIN9-204ENST00000460719 MRC2Q9UBG0 1479 aa8.09□□□□□ -1.11
LIN9-204ENST00000460719 CACNB1Q02641 598 aaPredicted RBP8.09□□□□□ -1.11
LIN9-204ENST00000460719 PRDM2Q13029 1718 aa8.09□□□□□ -1.11
LIN9-204ENST00000460719 BAZ1BQ9UIG0 1483 aaKnown RBP8.09□□□□□ -1.12
LIN9-204ENST00000460719 PLPPR3Q6T4P5 718 aa8.07□□□□□ -1.12
LIN9-204ENST00000460719 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
LIN9-204ENST00000460719 CADPSQ9ULU8 1353 aa7.98□□□□□ -1.13
LIN9-204ENST00000460719 NESP48681 1621 aa7.98□□□□□ -1.13
LIN9-204ENST00000460719 CEP164Q9UPV0 1460 aa7.95□□□□□ -1.14
LIN9-204ENST00000460719 ABCC8Q09428 1581 aa7.93□□□□□ -1.14
LIN9-204ENST00000460719 RIMBP3CA6NJZ7 1639 aa7.92□□□□□ -1.14
LIN9-204ENST00000460719 RIMBP3BA6NNM3 1639 aa7.92□□□□□ -1.14
LIN9-204ENST00000460719 RIMBP3Q9UFD9 1639 aa7.92□□□□□ -1.14
LIN9-204ENST00000460719 CFTRP13569 1480 aa7.92□□□□□ -1.14
LIN9-204ENST00000460719 PPP6R1Q9UPN7 881 aa7.91□□□□□ -1.14
LIN9-204ENST00000460719 DMRT2Q9Y5R5 561 aa7.9□□□□□ -1.14
LIN9-204ENST00000460719 RSF1Q96T23 1441 aaPredicted RBP7.89□□□□□ -1.15
LIN9-204ENST00000460719 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
LIN9-204ENST00000460719 ADRA2BP18089 450 aa7.87□□□□□ -1.15
LIN9-204ENST00000460719 FANCD2Q9BXW9 1451 aa7.86□□□□□ -1.15
LIN9-204ENST00000460719 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
LIN9-204ENST00000460719 TOP2AP11388 1531 aaKnown RBP7.85□□□□□ -1.15
LIN9-204ENST00000460719 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
LIN9-204ENST00000460719 ARHGEF11O15085 1522 aa7.83□□□□□ -1.16
LIN9-204ENST00000460719 URB2Q14146 1524 aaKnown RBP7.81□□□□□ -1.16
LIN9-204ENST00000460719 DNMBPQ6XZF7 1577 aa7.8□□□□□ -1.16
LIN9-204ENST00000460719 SCAF1Q9H7N4 1312 aaKnown RBP7.79□□□□□ -1.16
LIN9-204ENST00000460719 EIF4G3O43432 1585 aaKnown RBP7.78□□□□□ -1.16
LIN9-204ENST00000460719 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
LIN9-204ENST00000460719 TARBP1Q13395 1621 aaKnown RBP7.77□□□□□ -1.17
LIN9-204ENST00000460719 CHD1O14646 1710 aa7.76□□□□□ -1.17
LIN9-204ENST00000460719 WIZO95785 1651 aa7.75□□□□□ -1.17
LIN9-204ENST00000460719 SYNJ1O43426 1573 aa7.73□□□□□ -1.17
LIN9-204ENST00000460719 TRIM41Q8WV44 630 aa7.73□□□□□ -1.17
LIN9-204ENST00000460719 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
LIN9-204ENST00000460719 ARAP1Q96P48 1450 aa7.71□□□□□ -1.17
LIN9-204ENST00000460719 MAGI1Q96QZ7 1491 aaPredicted RBP7.71□□□□□ -1.17
LIN9-204ENST00000460719 C1QBPQ07021 282 aaKnown RBP7.69□□□□□ -1.18
LIN9-204ENST00000460719 RNF39Q9H2S5 420 aa7.65□□□□□ -1.18
LIN9-204ENST00000460719 SHROOM2Q13796 1616 aa7.64□□□□□ -1.19
LIN9-204ENST00000460719 PBRM1Q86U86 1689 aa7.62□□□□□ -1.19
LIN9-204ENST00000460719 ZNF608Q9ULD9 1512 aaPredicted RBP7.62□□□□□ -1.19
LIN9-204ENST00000460719 SYNJ2O15056 1496 aa7.61□□□□□ -1.19
LIN9-204ENST00000460719 GRIN2BQ13224 1484 aa7.6□□□□□ -1.19
LIN9-204ENST00000460719 ABCA5Q8WWZ7 1642 aa7.59□□□□□ -1.19
LIN9-204ENST00000460719 POTEHQ6S545 545 aa7.59□□□□□ -1.19
LIN9-204ENST00000460719 POLA1P09884 1462 aaPredicted RBP7.59□□□□□ -1.19
LIN9-204ENST00000460719 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
LIN9-204ENST00000460719 MAPKBP1O60336 1514 aa7.55□□□□□ -1.2
LIN9-204ENST00000460719 KIF13AQ9H1H9 1805 aa7.55□□□□□ -1.2
LIN9-204ENST00000460719 SNAPC4Q5SXM2 1469 aa7.54□□□□□ -1.2
LIN9-204ENST00000460719 ABCA10Q8WWZ4 1543 aa7.53□□□□□ -1.2
LIN9-204ENST00000460719 NUP160Q12769 1436 aa7.53□□□□□ -1.2
LIN9-204ENST00000460719 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
LIN9-204ENST00000460719 ADAMTS12P58397 1594 aa7.52□□□□□ -1.21
LIN9-204ENST00000460719 ERICH3Q5RHP9 1530 aa7.5□□□□□ -1.21
LIN9-204ENST00000460719 BIVM-ERCC5R4GMW8 1640 aa7.49□□□□□ -1.21
LIN9-204ENST00000460719 SOGA1O94964 1423 aa7.49□□□□□ -1.21
LIN9-204ENST00000460719 ERCC6L2Q5T890 1561 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms