RNA–Protein interactions for RNA: ENST00000455539.5

ICA1-213, Transcript of islet cell autoantigen 1, humanhuman

TSL 1 (best)

Gene ICA1, Length 1,956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ICA1-213ENST00000455539 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
ICA1-213ENST00000455539 ABCC9O60706 1549 aa27.77■■■□□ 2.04
ICA1-213ENST00000455539 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
ICA1-213ENST00000455539 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
ICA1-213ENST00000455539 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
ICA1-213ENST00000455539 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
ICA1-213ENST00000455539 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
ICA1-213ENST00000455539 NACADO15069 1562 aa25.76■■□□□ 1.72
ICA1-213ENST00000455539 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
ICA1-213ENST00000455539 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
ICA1-213ENST00000455539 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
ICA1-213ENST00000455539 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
ICA1-213ENST00000455539 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
ICA1-213ENST00000455539 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
ICA1-213ENST00000455539 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
ICA1-213ENST00000455539 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
ICA1-213ENST00000455539 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
ICA1-213ENST00000455539 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
ICA1-213ENST00000455539 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
ICA1-213ENST00000455539 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
ICA1-213ENST00000455539 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
ICA1-213ENST00000455539 CUX2O14529 1486 aa24.38■■□□□ 1.49
ICA1-213ENST00000455539 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
ICA1-213ENST00000455539 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
ICA1-213ENST00000455539 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
ICA1-213ENST00000455539 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
ICA1-213ENST00000455539 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
ICA1-213ENST00000455539 NESP48681 1621 aa23.61■■□□□ 1.37
ICA1-213ENST00000455539 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
ICA1-213ENST00000455539 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
ICA1-213ENST00000455539 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
ICA1-213ENST00000455539 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
ICA1-213ENST00000455539 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
ICA1-213ENST00000455539 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
ICA1-213ENST00000455539 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
ICA1-213ENST00000455539 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
ICA1-213ENST00000455539 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
ICA1-213ENST00000455539 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
ICA1-213ENST00000455539 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
ICA1-213ENST00000455539 WDR62O43379 1518 aa23.1■■□□□ 1.29
ICA1-213ENST00000455539 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
ICA1-213ENST00000455539 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
ICA1-213ENST00000455539 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
ICA1-213ENST00000455539 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
ICA1-213ENST00000455539 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
ICA1-213ENST00000455539 CEP164Q9UPV0 1460 aa22.83■■□□□ 1.25
ICA1-213ENST00000455539 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
ICA1-213ENST00000455539 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
ICA1-213ENST00000455539 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
ICA1-213ENST00000455539 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
ICA1-213ENST00000455539 CFTRP13569 1480 aa22.54■■□□□ 1.2
ICA1-213ENST00000455539 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
ICA1-213ENST00000455539 WIZO95785 1651 aa22.52■■□□□ 1.2
ICA1-213ENST00000455539 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
ICA1-213ENST00000455539 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
ICA1-213ENST00000455539 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
ICA1-213ENST00000455539 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
ICA1-213ENST00000455539 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
ICA1-213ENST00000455539 CHD1O14646 1710 aa22.32■■□□□ 1.16
ICA1-213ENST00000455539 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
ICA1-213ENST00000455539 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
ICA1-213ENST00000455539 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
ICA1-213ENST00000455539 TOPBP1Q92547 1522 aa22.2■■□□□ 1.15
ICA1-213ENST00000455539 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
ICA1-213ENST00000455539 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
ICA1-213ENST00000455539 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
ICA1-213ENST00000455539 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
ICA1-213ENST00000455539 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
ICA1-213ENST00000455539 FBLN2P98095 1184 aa22.06■■□□□ 1.12
ICA1-213ENST00000455539 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
ICA1-213ENST00000455539 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
ICA1-213ENST00000455539 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
ICA1-213ENST00000455539 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
ICA1-213ENST00000455539 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
ICA1-213ENST00000455539 SNAPC4Q5SXM2 1469 aa21.89■■□□□ 1.09
ICA1-213ENST00000455539 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
ICA1-213ENST00000455539 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
ICA1-213ENST00000455539 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
ICA1-213ENST00000455539 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
ICA1-213ENST00000455539 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
ICA1-213ENST00000455539 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
ICA1-213ENST00000455539 SOGA1O94964 1423 aa21.78■■□□□ 1.08
ICA1-213ENST00000455539 SYNJ2O15056 1496 aa21.75■■□□□ 1.07
ICA1-213ENST00000455539 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
ICA1-213ENST00000455539 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
ICA1-213ENST00000455539 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
ICA1-213ENST00000455539 KIF13AQ9H1H9 1805 aa21.63■■□□□ 1.05
ICA1-213ENST00000455539 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
ICA1-213ENST00000455539 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
ICA1-213ENST00000455539 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
ICA1-213ENST00000455539 CUX1P39880 1505 aa21.5■■□□□ 1.03
ICA1-213ENST00000455539 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
ICA1-213ENST00000455539 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
ICA1-213ENST00000455539 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
ICA1-213ENST00000455539 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
ICA1-213ENST00000455539 NUP160Q12769 1436 aa21.42■■□□□ 1.02
ICA1-213ENST00000455539 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
ICA1-213ENST00000455539 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
ICA1-213ENST00000455539 KDM6BO15054 1643 aa21.35■■□□□ 1.01
ICA1-213ENST00000455539 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms