RNA–Protein interactions for RNA: ENST00000452345.1

SP100-211, Transcript of SP100 nuclear antigen, humanhuman

TSL 2

Gene SP100, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-211ENST00000452345 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
SP100-211ENST00000452345 ABCC9O60706 1549 aa24.38■■□□□ 1.49
SP100-211ENST00000452345 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
SP100-211ENST00000452345 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
SP100-211ENST00000452345 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
SP100-211ENST00000452345 NACADO15069 1562 aa22.7■■□□□ 1.22
SP100-211ENST00000452345 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
SP100-211ENST00000452345 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
SP100-211ENST00000452345 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
SP100-211ENST00000452345 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
SP100-211ENST00000452345 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
SP100-211ENST00000452345 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
SP100-211ENST00000452345 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
SP100-211ENST00000452345 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SP100-211ENST00000452345 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
SP100-211ENST00000452345 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
SP100-211ENST00000452345 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
SP100-211ENST00000452345 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
SP100-211ENST00000452345 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
SP100-211ENST00000452345 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
SP100-211ENST00000452345 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
SP100-211ENST00000452345 CUX2O14529 1486 aa21.07■□□□□ 0.96
SP100-211ENST00000452345 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
SP100-211ENST00000452345 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
SP100-211ENST00000452345 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
SP100-211ENST00000452345 NESP48681 1621 aa20.89■□□□□ 0.93
SP100-211ENST00000452345 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
SP100-211ENST00000452345 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
SP100-211ENST00000452345 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
SP100-211ENST00000452345 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
SP100-211ENST00000452345 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
SP100-211ENST00000452345 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
SP100-211ENST00000452345 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
SP100-211ENST00000452345 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
SP100-211ENST00000452345 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
SP100-211ENST00000452345 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
SP100-211ENST00000452345 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
SP100-211ENST00000452345 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
SP100-211ENST00000452345 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
SP100-211ENST00000452345 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
SP100-211ENST00000452345 WDR62O43379 1518 aa20.31■□□□□ 0.84
SP100-211ENST00000452345 WIZO95785 1651 aa20.22■□□□□ 0.83
SP100-211ENST00000452345 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
SP100-211ENST00000452345 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
SP100-211ENST00000452345 CFTRP13569 1480 aa20.07■□□□□ 0.8
SP100-211ENST00000452345 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
SP100-211ENST00000452345 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
SP100-211ENST00000452345 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
SP100-211ENST00000452345 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
SP100-211ENST00000452345 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
SP100-211ENST00000452345 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
SP100-211ENST00000452345 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
SP100-211ENST00000452345 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
SP100-211ENST00000452345 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
SP100-211ENST00000452345 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
SP100-211ENST00000452345 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
SP100-211ENST00000452345 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
SP100-211ENST00000452345 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
SP100-211ENST00000452345 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
SP100-211ENST00000452345 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
SP100-211ENST00000452345 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
SP100-211ENST00000452345 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
SP100-211ENST00000452345 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
SP100-211ENST00000452345 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
SP100-211ENST00000452345 CHD1O14646 1710 aa19.57■□□□□ 0.72
SP100-211ENST00000452345 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
SP100-211ENST00000452345 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
SP100-211ENST00000452345 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
SP100-211ENST00000452345 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
SP100-211ENST00000452345 FBLN2P98095 1184 aa19.47■□□□□ 0.71
SP100-211ENST00000452345 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
SP100-211ENST00000452345 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
SP100-211ENST00000452345 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
SP100-211ENST00000452345 SOGA1O94964 1423 aa19.37■□□□□ 0.69
SP100-211ENST00000452345 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
SP100-211ENST00000452345 CUX1P39880 1505 aa19.29■□□□□ 0.68
SP100-211ENST00000452345 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
SP100-211ENST00000452345 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
SP100-211ENST00000452345 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SP100-211ENST00000452345 GRIN2BQ13224 1484 aa19.23■□□□□ 0.67
SP100-211ENST00000452345 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
SP100-211ENST00000452345 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
SP100-211ENST00000452345 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
SP100-211ENST00000452345 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
SP100-211ENST00000452345 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
SP100-211ENST00000452345 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
SP100-211ENST00000452345 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
SP100-211ENST00000452345 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
SP100-211ENST00000452345 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
SP100-211ENST00000452345 NUP160Q12769 1436 aa19■□□□□ 0.63
SP100-211ENST00000452345 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
SP100-211ENST00000452345 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
SP100-211ENST00000452345 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
SP100-211ENST00000452345 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
SP100-211ENST00000452345 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
SP100-211ENST00000452345 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
SP100-211ENST00000452345 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
SP100-211ENST00000452345 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
SP100-211ENST00000452345 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
SP100-211ENST00000452345 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms