RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
SATB1-208ENST00000452260 ABCC9O60706 1549 aa22.54■■□□□ 1.2
SATB1-208ENST00000452260 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
SATB1-208ENST00000452260 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
SATB1-208ENST00000452260 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
SATB1-208ENST00000452260 NACADO15069 1562 aa21.18■□□□□ 0.98
SATB1-208ENST00000452260 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
SATB1-208ENST00000452260 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
SATB1-208ENST00000452260 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
SATB1-208ENST00000452260 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
SATB1-208ENST00000452260 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
SATB1-208ENST00000452260 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
SATB1-208ENST00000452260 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
SATB1-208ENST00000452260 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
SATB1-208ENST00000452260 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
SATB1-208ENST00000452260 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
SATB1-208ENST00000452260 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
SATB1-208ENST00000452260 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
SATB1-208ENST00000452260 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
SATB1-208ENST00000452260 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
SATB1-208ENST00000452260 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
SATB1-208ENST00000452260 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
SATB1-208ENST00000452260 CUX2O14529 1486 aa19.54■□□□□ 0.72
SATB1-208ENST00000452260 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
SATB1-208ENST00000452260 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
SATB1-208ENST00000452260 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
SATB1-208ENST00000452260 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
SATB1-208ENST00000452260 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
SATB1-208ENST00000452260 NESP48681 1621 aa19.28■□□□□ 0.68
SATB1-208ENST00000452260 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
SATB1-208ENST00000452260 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.67
SATB1-208ENST00000452260 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
SATB1-208ENST00000452260 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
SATB1-208ENST00000452260 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
SATB1-208ENST00000452260 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
SATB1-208ENST00000452260 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
SATB1-208ENST00000452260 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
SATB1-208ENST00000452260 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
SATB1-208ENST00000452260 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
SATB1-208ENST00000452260 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
SATB1-208ENST00000452260 WDR62O43379 1518 aa18.83■□□□□ 0.6
SATB1-208ENST00000452260 WIZO95785 1651 aa18.81■□□□□ 0.6
SATB1-208ENST00000452260 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
SATB1-208ENST00000452260 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
SATB1-208ENST00000452260 CFTRP13569 1480 aa18.69■□□□□ 0.58
SATB1-208ENST00000452260 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
SATB1-208ENST00000452260 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
SATB1-208ENST00000452260 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
SATB1-208ENST00000452260 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
SATB1-208ENST00000452260 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
SATB1-208ENST00000452260 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
SATB1-208ENST00000452260 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
SATB1-208ENST00000452260 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
SATB1-208ENST00000452260 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
SATB1-208ENST00000452260 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
SATB1-208ENST00000452260 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
SATB1-208ENST00000452260 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
SATB1-208ENST00000452260 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
SATB1-208ENST00000452260 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
SATB1-208ENST00000452260 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
SATB1-208ENST00000452260 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
SATB1-208ENST00000452260 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
SATB1-208ENST00000452260 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
SATB1-208ENST00000452260 FBLN2P98095 1184 aa18.19■□□□□ 0.5
SATB1-208ENST00000452260 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
SATB1-208ENST00000452260 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
SATB1-208ENST00000452260 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
SATB1-208ENST00000452260 CHD1O14646 1710 aa18.12■□□□□ 0.49
SATB1-208ENST00000452260 SOGA1O94964 1423 aa18.1■□□□□ 0.49
SATB1-208ENST00000452260 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
SATB1-208ENST00000452260 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
SATB1-208ENST00000452260 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
SATB1-208ENST00000452260 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
SATB1-208ENST00000452260 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
SATB1-208ENST00000452260 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
SATB1-208ENST00000452260 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
SATB1-208ENST00000452260 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
SATB1-208ENST00000452260 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
SATB1-208ENST00000452260 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
SATB1-208ENST00000452260 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
SATB1-208ENST00000452260 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
SATB1-208ENST00000452260 CUX1P39880 1505 aa17.93■□□□□ 0.46
SATB1-208ENST00000452260 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
SATB1-208ENST00000452260 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
SATB1-208ENST00000452260 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
SATB1-208ENST00000452260 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
SATB1-208ENST00000452260 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
SATB1-208ENST00000452260 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SATB1-208ENST00000452260 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
SATB1-208ENST00000452260 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
SATB1-208ENST00000452260 NUP160Q12769 1436 aa17.66■□□□□ 0.42
SATB1-208ENST00000452260 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.42
SATB1-208ENST00000452260 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
SATB1-208ENST00000452260 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
SATB1-208ENST00000452260 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
SATB1-208ENST00000452260 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
SATB1-208ENST00000452260 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
SATB1-208ENST00000452260 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
SATB1-208ENST00000452260 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
SATB1-208ENST00000452260 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms