RNA–Protein interactions for RNA: ENST00000451554.1

CCDC148-206, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-206ENST00000451554 NISCHQ9Y2I1 1504 aa37.25■■■■□ 3.55
CCDC148-206ENST00000451554 ABCC9O60706 1549 aa33.87■■■■□ 3.01
CCDC148-206ENST00000451554 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
CCDC148-206ENST00000451554 RB1CC1Q8TDY2 1594 aa32.12■■■□□ 2.73
CCDC148-206ENST00000451554 DNAJC5BQ9UF47 199 aa32.02■■■□□ 2.72
CCDC148-206ENST00000451554 NACADO15069 1562 aa31.81■■■□□ 2.68
CCDC148-206ENST00000451554 UNC13AQ9UPW8 1703 aa31.53■■■□□ 2.64
CCDC148-206ENST00000451554 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
CCDC148-206ENST00000451554 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
CCDC148-206ENST00000451554 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.6
CCDC148-206ENST00000451554 BICRAQ9NZM4 1560 aa31.24■■■□□ 2.59
CCDC148-206ENST00000451554 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
CCDC148-206ENST00000451554 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
CCDC148-206ENST00000451554 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
CCDC148-206ENST00000451554 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
CCDC148-206ENST00000451554 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
CCDC148-206ENST00000451554 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
CCDC148-206ENST00000451554 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
CCDC148-206ENST00000451554 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
CCDC148-206ENST00000451554 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
CCDC148-206ENST00000451554 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
CCDC148-206ENST00000451554 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
CCDC148-206ENST00000451554 CUX2O14529 1486 aa29.32■■■□□ 2.28
CCDC148-206ENST00000451554 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
CCDC148-206ENST00000451554 ATAD2BQ9ULI0 1458 aa29.22■■■□□ 2.27
CCDC148-206ENST00000451554 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
CCDC148-206ENST00000451554 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
CCDC148-206ENST00000451554 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
CCDC148-206ENST00000451554 NESP48681 1621 aa29.03■■■□□ 2.24
CCDC148-206ENST00000451554 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
CCDC148-206ENST00000451554 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
CCDC148-206ENST00000451554 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.21
CCDC148-206ENST00000451554 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
CCDC148-206ENST00000451554 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
CCDC148-206ENST00000451554 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
CCDC148-206ENST00000451554 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
CCDC148-206ENST00000451554 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
CCDC148-206ENST00000451554 CADPSQ9ULU8 1353 aa28.41■■■□□ 2.14
CCDC148-206ENST00000451554 WIZO95785 1651 aa28.4■■■□□ 2.14
CCDC148-206ENST00000451554 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
CCDC148-206ENST00000451554 WDR62O43379 1518 aa28.35■■■□□ 2.13
CCDC148-206ENST00000451554 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
CCDC148-206ENST00000451554 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
CCDC148-206ENST00000451554 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
CCDC148-206ENST00000451554 CFTRP13569 1480 aa28.06■■■□□ 2.08
CCDC148-206ENST00000451554 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
CCDC148-206ENST00000451554 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
CCDC148-206ENST00000451554 URB2Q14146 1524 aaKnown RBP27.95■■■□□ 2.06
CCDC148-206ENST00000451554 PRDM2Q13029 1718 aa27.9■■■□□ 2.06
CCDC148-206ENST00000451554 OSCARQ8IYS5 282 aa27.83■■■□□ 2.05
CCDC148-206ENST00000451554 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
CCDC148-206ENST00000451554 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
CCDC148-206ENST00000451554 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
CCDC148-206ENST00000451554 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
CCDC148-206ENST00000451554 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
CCDC148-206ENST00000451554 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
CCDC148-206ENST00000451554 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
CCDC148-206ENST00000451554 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
CCDC148-206ENST00000451554 ARHGEF11O15085 1522 aa27.51■■□□□ 1.99
CCDC148-206ENST00000451554 DNMBPQ6XZF7 1577 aa27.47■■□□□ 1.99
CCDC148-206ENST00000451554 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
CCDC148-206ENST00000451554 CHD1O14646 1710 aa27.42■■□□□ 1.98
CCDC148-206ENST00000451554 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
CCDC148-206ENST00000451554 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
CCDC148-206ENST00000451554 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
CCDC148-206ENST00000451554 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
CCDC148-206ENST00000451554 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
CCDC148-206ENST00000451554 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
CCDC148-206ENST00000451554 FBLN2P98095 1184 aa27.13■■□□□ 1.93
CCDC148-206ENST00000451554 SOGA1O94964 1423 aa27.09■■□□□ 1.93
CCDC148-206ENST00000451554 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
CCDC148-206ENST00000451554 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
CCDC148-206ENST00000451554 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
CCDC148-206ENST00000451554 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
CCDC148-206ENST00000451554 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
CCDC148-206ENST00000451554 CUX1P39880 1505 aa27.01■■□□□ 1.91
CCDC148-206ENST00000451554 TRHP20396 242 aaPredicted RBP27■■□□□ 1.91
CCDC148-206ENST00000451554 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
CCDC148-206ENST00000451554 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
CCDC148-206ENST00000451554 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
CCDC148-206ENST00000451554 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
CCDC148-206ENST00000451554 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
CCDC148-206ENST00000451554 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
CCDC148-206ENST00000451554 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
CCDC148-206ENST00000451554 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
CCDC148-206ENST00000451554 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
CCDC148-206ENST00000451554 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
CCDC148-206ENST00000451554 ERCC6L2Q5T890 1561 aa26.61■■□□□ 1.85
CCDC148-206ENST00000451554 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
CCDC148-206ENST00000451554 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
CCDC148-206ENST00000451554 CEP170Q5SW79 1584 aa26.56■■□□□ 1.84
CCDC148-206ENST00000451554 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
CCDC148-206ENST00000451554 NUP160Q12769 1436 aa26.51■■□□□ 1.83
CCDC148-206ENST00000451554 WRNQ14191 1432 aaPredicted RBP eCLIP26.51■■□□□ 1.83
CCDC148-206ENST00000451554 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
CCDC148-206ENST00000451554 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
CCDC148-206ENST00000451554 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
CCDC148-206ENST00000451554 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
CCDC148-206ENST00000451554 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
CCDC148-206ENST00000451554 KIF13AQ9H1H9 1805 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms