RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
ABCF1-203ENST00000441867 ABCC9O60706 1549 aa21.66■■□□□ 1.06
ABCF1-203ENST00000441867 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
ABCF1-203ENST00000441867 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
ABCF1-203ENST00000441867 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
ABCF1-203ENST00000441867 NACADO15069 1562 aa20.21■□□□□ 0.83
ABCF1-203ENST00000441867 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
ABCF1-203ENST00000441867 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
ABCF1-203ENST00000441867 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
ABCF1-203ENST00000441867 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
ABCF1-203ENST00000441867 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
ABCF1-203ENST00000441867 UNC13AQ9UPW8 1703 aa19.75■□□□□ 0.75
ABCF1-203ENST00000441867 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
ABCF1-203ENST00000441867 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
ABCF1-203ENST00000441867 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
ABCF1-203ENST00000441867 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
ABCF1-203ENST00000441867 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
ABCF1-203ENST00000441867 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
ABCF1-203ENST00000441867 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
ABCF1-203ENST00000441867 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
ABCF1-203ENST00000441867 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
ABCF1-203ENST00000441867 CUX2O14529 1486 aa18.91■□□□□ 0.62
ABCF1-203ENST00000441867 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
ABCF1-203ENST00000441867 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
ABCF1-203ENST00000441867 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
ABCF1-203ENST00000441867 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
ABCF1-203ENST00000441867 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
ABCF1-203ENST00000441867 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
ABCF1-203ENST00000441867 NESP48681 1621 aa18.45■□□□□ 0.54
ABCF1-203ENST00000441867 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
ABCF1-203ENST00000441867 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
ABCF1-203ENST00000441867 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
ABCF1-203ENST00000441867 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
ABCF1-203ENST00000441867 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
ABCF1-203ENST00000441867 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
ABCF1-203ENST00000441867 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
ABCF1-203ENST00000441867 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
ABCF1-203ENST00000441867 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
ABCF1-203ENST00000441867 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
ABCF1-203ENST00000441867 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
ABCF1-203ENST00000441867 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
ABCF1-203ENST00000441867 WDR62O43379 1518 aa18.03■□□□□ 0.48
ABCF1-203ENST00000441867 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
ABCF1-203ENST00000441867 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
ABCF1-203ENST00000441867 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
ABCF1-203ENST00000441867 CFTRP13569 1480 aa17.79■□□□□ 0.44
ABCF1-203ENST00000441867 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
ABCF1-203ENST00000441867 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
ABCF1-203ENST00000441867 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
ABCF1-203ENST00000441867 WIZO95785 1651 aa17.72■□□□□ 0.43
ABCF1-203ENST00000441867 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
ABCF1-203ENST00000441867 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
ABCF1-203ENST00000441867 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
ABCF1-203ENST00000441867 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
ABCF1-203ENST00000441867 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
ABCF1-203ENST00000441867 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
ABCF1-203ENST00000441867 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
ABCF1-203ENST00000441867 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
ABCF1-203ENST00000441867 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
ABCF1-203ENST00000441867 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
ABCF1-203ENST00000441867 FBLN2P98095 1184 aa17.42■□□□□ 0.38
ABCF1-203ENST00000441867 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
ABCF1-203ENST00000441867 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
ABCF1-203ENST00000441867 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.371e-8■■■■■ 27.4
ABCF1-203ENST00000441867 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
ABCF1-203ENST00000441867 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
ABCF1-203ENST00000441867 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
ABCF1-203ENST00000441867 CHD1O14646 1710 aa17.28■□□□□ 0.36
ABCF1-203ENST00000441867 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
ABCF1-203ENST00000441867 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
ABCF1-203ENST00000441867 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
ABCF1-203ENST00000441867 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
ABCF1-203ENST00000441867 SOGA1O94964 1423 aa17.22■□□□□ 0.35
ABCF1-203ENST00000441867 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
ABCF1-203ENST00000441867 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
ABCF1-203ENST00000441867 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
ABCF1-203ENST00000441867 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
ABCF1-203ENST00000441867 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
ABCF1-203ENST00000441867 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
ABCF1-203ENST00000441867 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
ABCF1-203ENST00000441867 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
ABCF1-203ENST00000441867 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
ABCF1-203ENST00000441867 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
ABCF1-203ENST00000441867 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
ABCF1-203ENST00000441867 CUX1P39880 1505 aa16.96■□□□□ 0.31
ABCF1-203ENST00000441867 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
ABCF1-203ENST00000441867 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
ABCF1-203ENST00000441867 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
ABCF1-203ENST00000441867 NUP160Q12769 1436 aa16.85■□□□□ 0.29
ABCF1-203ENST00000441867 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
ABCF1-203ENST00000441867 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
ABCF1-203ENST00000441867 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
ABCF1-203ENST00000441867 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
ABCF1-203ENST00000441867 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
ABCF1-203ENST00000441867 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
ABCF1-203ENST00000441867 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■■□ 21.1
ABCF1-203ENST00000441867 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
ABCF1-203ENST00000441867 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
ABCF1-203ENST00000441867 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
ABCF1-203ENST00000441867 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms