RNA–Protein interactions for RNA: ENST00000429988.2

PCNX2-204, Transcript of pecanex 2, humanhuman

TSL 4

Gene PCNX2, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-204ENST00000429988 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
PCNX2-204ENST00000429988 ABCC9O60706 1549 aa22.05■■□□□ 1.12
PCNX2-204ENST00000429988 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
PCNX2-204ENST00000429988 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
PCNX2-204ENST00000429988 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
PCNX2-204ENST00000429988 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
PCNX2-204ENST00000429988 NACADO15069 1562 aa20.3■□□□□ 0.84
PCNX2-204ENST00000429988 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
PCNX2-204ENST00000429988 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
PCNX2-204ENST00000429988 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
PCNX2-204ENST00000429988 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
PCNX2-204ENST00000429988 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
PCNX2-204ENST00000429988 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
PCNX2-204ENST00000429988 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
PCNX2-204ENST00000429988 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
PCNX2-204ENST00000429988 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
PCNX2-204ENST00000429988 CUX2O14529 1486 aa19.35■□□□□ 0.69
PCNX2-204ENST00000429988 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
PCNX2-204ENST00000429988 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
PCNX2-204ENST00000429988 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
PCNX2-204ENST00000429988 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
PCNX2-204ENST00000429988 TRIM41Q8WV44 630 aa19.08■□□□□ 0.64
PCNX2-204ENST00000429988 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
PCNX2-204ENST00000429988 NESP48681 1621 aa18.68■□□□□ 0.58
PCNX2-204ENST00000429988 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.58
PCNX2-204ENST00000429988 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
PCNX2-204ENST00000429988 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
PCNX2-204ENST00000429988 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
PCNX2-204ENST00000429988 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
PCNX2-204ENST00000429988 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
PCNX2-204ENST00000429988 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
PCNX2-204ENST00000429988 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
PCNX2-204ENST00000429988 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
PCNX2-204ENST00000429988 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
PCNX2-204ENST00000429988 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
PCNX2-204ENST00000429988 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
PCNX2-204ENST00000429988 WDR62O43379 1518 aa18.23■□□□□ 0.51
PCNX2-204ENST00000429988 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
PCNX2-204ENST00000429988 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
PCNX2-204ENST00000429988 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
PCNX2-204ENST00000429988 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
PCNX2-204ENST00000429988 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
PCNX2-204ENST00000429988 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
PCNX2-204ENST00000429988 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
PCNX2-204ENST00000429988 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
PCNX2-204ENST00000429988 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
PCNX2-204ENST00000429988 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
PCNX2-204ENST00000429988 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
PCNX2-204ENST00000429988 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
PCNX2-204ENST00000429988 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
PCNX2-204ENST00000429988 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
PCNX2-204ENST00000429988 CFTRP13569 1480 aa17.75■□□□□ 0.43
PCNX2-204ENST00000429988 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
PCNX2-204ENST00000429988 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
PCNX2-204ENST00000429988 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
PCNX2-204ENST00000429988 WIZO95785 1651 aa17.67■□□□□ 0.42
PCNX2-204ENST00000429988 CHD1O14646 1710 aa17.62■□□□□ 0.41
PCNX2-204ENST00000429988 FBLN2P98095 1184 aa17.6■□□□□ 0.41
PCNX2-204ENST00000429988 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
PCNX2-204ENST00000429988 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
PCNX2-204ENST00000429988 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
PCNX2-204ENST00000429988 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCNX2-204ENST00000429988 ILDR1Q86SU0 546 aaPredicted RBP17.47■□□□□ 0.39
PCNX2-204ENST00000429988 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
PCNX2-204ENST00000429988 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
PCNX2-204ENST00000429988 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
PCNX2-204ENST00000429988 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
PCNX2-204ENST00000429988 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
PCNX2-204ENST00000429988 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
PCNX2-204ENST00000429988 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
PCNX2-204ENST00000429988 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PCNX2-204ENST00000429988 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
PCNX2-204ENST00000429988 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
PCNX2-204ENST00000429988 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
PCNX2-204ENST00000429988 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
PCNX2-204ENST00000429988 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
PCNX2-204ENST00000429988 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
PCNX2-204ENST00000429988 SOGA1O94964 1423 aa17.21■□□□□ 0.34
PCNX2-204ENST00000429988 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
PCNX2-204ENST00000429988 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
PCNX2-204ENST00000429988 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
PCNX2-204ENST00000429988 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
PCNX2-204ENST00000429988 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
PCNX2-204ENST00000429988 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
PCNX2-204ENST00000429988 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
PCNX2-204ENST00000429988 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
PCNX2-204ENST00000429988 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
PCNX2-204ENST00000429988 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
PCNX2-204ENST00000429988 KDM6BO15054 1643 aa16.96■□□□□ 0.3
PCNX2-204ENST00000429988 ABCC10Q5T3U5 1492 aa16.94■□□□□ 0.3
PCNX2-204ENST00000429988 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCNX2-204ENST00000429988 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
PCNX2-204ENST00000429988 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
PCNX2-204ENST00000429988 CUX1P39880 1505 aa16.88■□□□□ 0.29
PCNX2-204ENST00000429988 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
PCNX2-204ENST00000429988 NUP160Q12769 1436 aa16.87■□□□□ 0.29
PCNX2-204ENST00000429988 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
PCNX2-204ENST00000429988 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
PCNX2-204ENST00000429988 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
PCNX2-204ENST00000429988 HECW2Q9P2P5 1572 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms