RNA–Protein interactions for RNA: ENST00000429805.1

PNPT1-204, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-204ENST00000429805 NISCHQ9Y2I1 1504 aa29.12■■■□□ 2.25
PNPT1-204ENST00000429805 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
PNPT1-204ENST00000429805 ABCC9O60706 1549 aa25.68■■□□□ 1.7
PNPT1-204ENST00000429805 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
PNPT1-204ENST00000429805 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
PNPT1-204ENST00000429805 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
PNPT1-204ENST00000429805 NACADO15069 1562 aa24.32■■□□□ 1.48
PNPT1-204ENST00000429805 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
PNPT1-204ENST00000429805 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
PNPT1-204ENST00000429805 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
PNPT1-204ENST00000429805 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
PNPT1-204ENST00000429805 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
PNPT1-204ENST00000429805 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
PNPT1-204ENST00000429805 BICRAQ9NZM4 1560 aa23.79■■□□□ 1.4
PNPT1-204ENST00000429805 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
PNPT1-204ENST00000429805 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
PNPT1-204ENST00000429805 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
PNPT1-204ENST00000429805 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
PNPT1-204ENST00000429805 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
PNPT1-204ENST00000429805 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
PNPT1-204ENST00000429805 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
PNPT1-204ENST00000429805 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
PNPT1-204ENST00000429805 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
PNPT1-204ENST00000429805 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
PNPT1-204ENST00000429805 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
PNPT1-204ENST00000429805 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
PNPT1-204ENST00000429805 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
PNPT1-204ENST00000429805 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
PNPT1-204ENST00000429805 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PNPT1-204ENST00000429805 WIZO95785 1651 aa22.23■■□□□ 1.15
PNPT1-204ENST00000429805 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
PNPT1-204ENST00000429805 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
PNPT1-204ENST00000429805 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
PNPT1-204ENST00000429805 NESP48681 1621 aa22.13■■□□□ 1.13
PNPT1-204ENST00000429805 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
PNPT1-204ENST00000429805 CUX2O14529 1486 aa22.02■■□□□ 1.12
PNPT1-204ENST00000429805 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
PNPT1-204ENST00000429805 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
PNPT1-204ENST00000429805 THOC2Q8NI27 1593 aaKnown RBP21.85■■□□□ 1.09
PNPT1-204ENST00000429805 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
PNPT1-204ENST00000429805 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
PNPT1-204ENST00000429805 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
PNPT1-204ENST00000429805 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
PNPT1-204ENST00000429805 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
PNPT1-204ENST00000429805 CFTRP13569 1480 aa21.57■■□□□ 1.04
PNPT1-204ENST00000429805 WDR62O43379 1518 aa21.56■■□□□ 1.04
PNPT1-204ENST00000429805 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
PNPT1-204ENST00000429805 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
PNPT1-204ENST00000429805 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
PNPT1-204ENST00000429805 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
PNPT1-204ENST00000429805 TRIM41Q8WV44 630 aa21.28■■□□□ 1
PNPT1-204ENST00000429805 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
PNPT1-204ENST00000429805 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
PNPT1-204ENST00000429805 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
PNPT1-204ENST00000429805 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
PNPT1-204ENST00000429805 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
PNPT1-204ENST00000429805 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
PNPT1-204ENST00000429805 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
PNPT1-204ENST00000429805 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
PNPT1-204ENST00000429805 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
PNPT1-204ENST00000429805 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
PNPT1-204ENST00000429805 CUX1P39880 1505 aa21.01■□□□□ 0.95
PNPT1-204ENST00000429805 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
PNPT1-204ENST00000429805 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
PNPT1-204ENST00000429805 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
PNPT1-204ENST00000429805 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PNPT1-204ENST00000429805 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.94
PNPT1-204ENST00000429805 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
PNPT1-204ENST00000429805 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
PNPT1-204ENST00000429805 SOGA1O94964 1423 aa20.86■□□□□ 0.93
PNPT1-204ENST00000429805 CHD1O14646 1710 aa20.83■□□□□ 0.92
PNPT1-204ENST00000429805 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
PNPT1-204ENST00000429805 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
PNPT1-204ENST00000429805 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
PNPT1-204ENST00000429805 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
PNPT1-204ENST00000429805 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
PNPT1-204ENST00000429805 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
PNPT1-204ENST00000429805 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
PNPT1-204ENST00000429805 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
PNPT1-204ENST00000429805 FBLN2P98095 1184 aa20.74■□□□□ 0.91
PNPT1-204ENST00000429805 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
PNPT1-204ENST00000429805 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
PNPT1-204ENST00000429805 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
PNPT1-204ENST00000429805 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
PNPT1-204ENST00000429805 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
PNPT1-204ENST00000429805 KIF21BO75037 1637 aa20.65■□□□□ 0.9
PNPT1-204ENST00000429805 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
PNPT1-204ENST00000429805 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
PNPT1-204ENST00000429805 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
PNPT1-204ENST00000429805 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
PNPT1-204ENST00000429805 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
PNPT1-204ENST00000429805 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
PNPT1-204ENST00000429805 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
PNPT1-204ENST00000429805 GOLGA3Q08378 1498 aa20.58■□□□□ 0.89
PNPT1-204ENST00000429805 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
PNPT1-204ENST00000429805 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
PNPT1-204ENST00000429805 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
PNPT1-204ENST00000429805 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
PNPT1-204ENST00000429805 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PNPT1-204ENST00000429805 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms