RNA–Protein interactions for RNA: ENST00000427371.3

UBE2E2-204, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 3

Gene UBE2E2, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-204ENST00000427371 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
UBE2E2-204ENST00000427371 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
UBE2E2-204ENST00000427371 ABCC9O60706 1549 aa27.7■■■□□ 2.02
UBE2E2-204ENST00000427371 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
UBE2E2-204ENST00000427371 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
UBE2E2-204ENST00000427371 NACADO15069 1562 aa26.25■■□□□ 1.79
UBE2E2-204ENST00000427371 DNAJC5BQ9UF47 199 aa26.13■■□□□ 1.77
UBE2E2-204ENST00000427371 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
UBE2E2-204ENST00000427371 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
UBE2E2-204ENST00000427371 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
UBE2E2-204ENST00000427371 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
UBE2E2-204ENST00000427371 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
UBE2E2-204ENST00000427371 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
UBE2E2-204ENST00000427371 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
UBE2E2-204ENST00000427371 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
UBE2E2-204ENST00000427371 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
UBE2E2-204ENST00000427371 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
UBE2E2-204ENST00000427371 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
UBE2E2-204ENST00000427371 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
UBE2E2-204ENST00000427371 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
UBE2E2-204ENST00000427371 NCAPD3P42695 1498 aa24.2■■□□□ 1.47
UBE2E2-204ENST00000427371 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
UBE2E2-204ENST00000427371 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
UBE2E2-204ENST00000427371 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
UBE2E2-204ENST00000427371 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
UBE2E2-204ENST00000427371 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
UBE2E2-204ENST00000427371 CUX2O14529 1486 aa24.02■■□□□ 1.44
UBE2E2-204ENST00000427371 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
UBE2E2-204ENST00000427371 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
UBE2E2-204ENST00000427371 NESP48681 1621 aa23.84■■□□□ 1.41
UBE2E2-204ENST00000427371 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
UBE2E2-204ENST00000427371 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
UBE2E2-204ENST00000427371 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
UBE2E2-204ENST00000427371 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
UBE2E2-204ENST00000427371 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
UBE2E2-204ENST00000427371 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
UBE2E2-204ENST00000427371 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
UBE2E2-204ENST00000427371 WIZO95785 1651 aa23.49■■□□□ 1.35
UBE2E2-204ENST00000427371 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
UBE2E2-204ENST00000427371 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
UBE2E2-204ENST00000427371 WDR62O43379 1518 aa23.36■■□□□ 1.33
UBE2E2-204ENST00000427371 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
UBE2E2-204ENST00000427371 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
UBE2E2-204ENST00000427371 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
UBE2E2-204ENST00000427371 CFTRP13569 1480 aa23.17■■□□□ 1.3
UBE2E2-204ENST00000427371 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
UBE2E2-204ENST00000427371 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
UBE2E2-204ENST00000427371 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
UBE2E2-204ENST00000427371 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
UBE2E2-204ENST00000427371 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
UBE2E2-204ENST00000427371 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
UBE2E2-204ENST00000427371 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
UBE2E2-204ENST00000427371 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
UBE2E2-204ENST00000427371 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
UBE2E2-204ENST00000427371 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
UBE2E2-204ENST00000427371 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
UBE2E2-204ENST00000427371 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
UBE2E2-204ENST00000427371 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
UBE2E2-204ENST00000427371 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
UBE2E2-204ENST00000427371 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
UBE2E2-204ENST00000427371 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
UBE2E2-204ENST00000427371 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
UBE2E2-204ENST00000427371 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
UBE2E2-204ENST00000427371 CHD1O14646 1710 aa22.6■■□□□ 1.21
UBE2E2-204ENST00000427371 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
UBE2E2-204ENST00000427371 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
UBE2E2-204ENST00000427371 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
UBE2E2-204ENST00000427371 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
UBE2E2-204ENST00000427371 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
UBE2E2-204ENST00000427371 CUX1P39880 1505 aa22.32■■□□□ 1.16
UBE2E2-204ENST00000427371 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
UBE2E2-204ENST00000427371 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
UBE2E2-204ENST00000427371 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
UBE2E2-204ENST00000427371 SOGA1O94964 1423 aa22.25■■□□□ 1.15
UBE2E2-204ENST00000427371 PBRM1Q86U86 1689 aa22.24■■□□□ 1.15
UBE2E2-204ENST00000427371 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
UBE2E2-204ENST00000427371 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
UBE2E2-204ENST00000427371 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
UBE2E2-204ENST00000427371 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
UBE2E2-204ENST00000427371 FOXD1Q16676 465 aa22.15■■□□□ 1.14
UBE2E2-204ENST00000427371 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
UBE2E2-204ENST00000427371 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
UBE2E2-204ENST00000427371 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
UBE2E2-204ENST00000427371 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
UBE2E2-204ENST00000427371 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
UBE2E2-204ENST00000427371 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
UBE2E2-204ENST00000427371 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
UBE2E2-204ENST00000427371 FBLN2P98095 1184 aa22.03■■□□□ 1.12
UBE2E2-204ENST00000427371 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
UBE2E2-204ENST00000427371 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
UBE2E2-204ENST00000427371 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
UBE2E2-204ENST00000427371 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
UBE2E2-204ENST00000427371 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
UBE2E2-204ENST00000427371 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
UBE2E2-204ENST00000427371 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
UBE2E2-204ENST00000427371 NUP160Q12769 1436 aa21.88■■□□□ 1.09
UBE2E2-204ENST00000427371 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
UBE2E2-204ENST00000427371 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
UBE2E2-204ENST00000427371 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
UBE2E2-204ENST00000427371 POTEDQ86YR6 584 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms