RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
LINC00476-203ENST00000427259 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
LINC00476-203ENST00000427259 ABCC9O60706 1549 aa29.25■■■□□ 2.27
LINC00476-203ENST00000427259 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
LINC00476-203ENST00000427259 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
LINC00476-203ENST00000427259 NACADO15069 1562 aa27.74■■■□□ 2.03
LINC00476-203ENST00000427259 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
LINC00476-203ENST00000427259 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
LINC00476-203ENST00000427259 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
LINC00476-203ENST00000427259 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
LINC00476-203ENST00000427259 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
LINC00476-203ENST00000427259 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
LINC00476-203ENST00000427259 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
LINC00476-203ENST00000427259 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
LINC00476-203ENST00000427259 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
LINC00476-203ENST00000427259 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
LINC00476-203ENST00000427259 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
LINC00476-203ENST00000427259 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
LINC00476-203ENST00000427259 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
LINC00476-203ENST00000427259 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
LINC00476-203ENST00000427259 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
LINC00476-203ENST00000427259 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
LINC00476-203ENST00000427259 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
LINC00476-203ENST00000427259 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
LINC00476-203ENST00000427259 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
LINC00476-203ENST00000427259 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
LINC00476-203ENST00000427259 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
LINC00476-203ENST00000427259 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
LINC00476-203ENST00000427259 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
LINC00476-203ENST00000427259 NESP48681 1621 aa25.25■■□□□ 1.63
LINC00476-203ENST00000427259 WIZO95785 1651 aa25.18■■□□□ 1.62
LINC00476-203ENST00000427259 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
LINC00476-203ENST00000427259 CUX2O14529 1486 aa25.02■■□□□ 1.6
LINC00476-203ENST00000427259 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
LINC00476-203ENST00000427259 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
LINC00476-203ENST00000427259 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
LINC00476-203ENST00000427259 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
LINC00476-203ENST00000427259 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
LINC00476-203ENST00000427259 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
LINC00476-203ENST00000427259 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
LINC00476-203ENST00000427259 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
LINC00476-203ENST00000427259 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
LINC00476-203ENST00000427259 CFTRP13569 1480 aa24.63■■□□□ 1.53
LINC00476-203ENST00000427259 MRC2Q9UBG0 1479 aa24.63■■□□□ 1.53
LINC00476-203ENST00000427259 WDR62O43379 1518 aa24.61■■□□□ 1.53
LINC00476-203ENST00000427259 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
LINC00476-203ENST00000427259 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
LINC00476-203ENST00000427259 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
LINC00476-203ENST00000427259 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
LINC00476-203ENST00000427259 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
LINC00476-203ENST00000427259 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
LINC00476-203ENST00000427259 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
LINC00476-203ENST00000427259 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
LINC00476-203ENST00000427259 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
LINC00476-203ENST00000427259 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
LINC00476-203ENST00000427259 ABCC8Q09428 1581 aa24■■□□□ 1.43
LINC00476-203ENST00000427259 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
LINC00476-203ENST00000427259 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
LINC00476-203ENST00000427259 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
LINC00476-203ENST00000427259 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
LINC00476-203ENST00000427259 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
LINC00476-203ENST00000427259 CUX1P39880 1505 aa23.88■■□□□ 1.41
LINC00476-203ENST00000427259 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
LINC00476-203ENST00000427259 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
LINC00476-203ENST00000427259 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
LINC00476-203ENST00000427259 CHD1O14646 1710 aa23.8■■□□□ 1.4
LINC00476-203ENST00000427259 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
LINC00476-203ENST00000427259 SOGA1O94964 1423 aa23.77■■□□□ 1.4
LINC00476-203ENST00000427259 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
LINC00476-203ENST00000427259 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
LINC00476-203ENST00000427259 RIMBP3CA6NJZ7 1639 aa23.7■■□□□ 1.39
LINC00476-203ENST00000427259 RIMBP3BA6NNM3 1639 aa23.7■■□□□ 1.39
LINC00476-203ENST00000427259 RIMBP3Q9UFD9 1639 aa23.7■■□□□ 1.39
LINC00476-203ENST00000427259 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
LINC00476-203ENST00000427259 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
LINC00476-203ENST00000427259 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
LINC00476-203ENST00000427259 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
LINC00476-203ENST00000427259 FBLN2P98095 1184 aa23.57■■□□□ 1.36
LINC00476-203ENST00000427259 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
LINC00476-203ENST00000427259 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
LINC00476-203ENST00000427259 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
LINC00476-203ENST00000427259 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
LINC00476-203ENST00000427259 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
LINC00476-203ENST00000427259 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
LINC00476-203ENST00000427259 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
LINC00476-203ENST00000427259 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
LINC00476-203ENST00000427259 CLASP1Q7Z460 1538 aa23.48■■□□□ 1.35
LINC00476-203ENST00000427259 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
LINC00476-203ENST00000427259 ARAP1Q96P48 1450 aa23.42■■□□□ 1.34
LINC00476-203ENST00000427259 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
LINC00476-203ENST00000427259 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
LINC00476-203ENST00000427259 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
LINC00476-203ENST00000427259 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
LINC00476-203ENST00000427259 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
LINC00476-203ENST00000427259 FOXD1Q16676 465 aa23.25■■□□□ 1.31
LINC00476-203ENST00000427259 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
LINC00476-203ENST00000427259 ERCC6L2Q5T890 1561 aa23.21■■□□□ 1.31
LINC00476-203ENST00000427259 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
LINC00476-203ENST00000427259 NUP160Q12769 1436 aa23.18■■□□□ 1.3
LINC00476-203ENST00000427259 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms