RNA–Protein interactions for RNA: ENST00000426929.1

SMYD3-IT1-201, SMYD3 intronic transcript 1, humanhuman

TSL 2 BASIC

Gene SMYD3-IT1, Length 361 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-IT1-201ENST00000426929 NISCHQ9Y2I1 1504 aa23.95■■□□□ 1.43
SMYD3-IT1-201ENST00000426929 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
SMYD3-IT1-201ENST00000426929 ABCC9O60706 1549 aa21.5■■□□□ 1.03
SMYD3-IT1-201ENST00000426929 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
SMYD3-IT1-201ENST00000426929 NACADO15069 1562 aa20.38■□□□□ 0.85
SMYD3-IT1-201ENST00000426929 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
SMYD3-IT1-201ENST00000426929 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
SMYD3-IT1-201ENST00000426929 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
SMYD3-IT1-201ENST00000426929 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
SMYD3-IT1-201ENST00000426929 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
SMYD3-IT1-201ENST00000426929 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
SMYD3-IT1-201ENST00000426929 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMYD3-IT1-201ENST00000426929 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
SMYD3-IT1-201ENST00000426929 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
SMYD3-IT1-201ENST00000426929 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
SMYD3-IT1-201ENST00000426929 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SMYD3-IT1-201ENST00000426929 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
SMYD3-IT1-201ENST00000426929 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
SMYD3-IT1-201ENST00000426929 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
SMYD3-IT1-201ENST00000426929 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
SMYD3-IT1-201ENST00000426929 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
SMYD3-IT1-201ENST00000426929 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
SMYD3-IT1-201ENST00000426929 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
SMYD3-IT1-201ENST00000426929 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
SMYD3-IT1-201ENST00000426929 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
SMYD3-IT1-201ENST00000426929 CUX2O14529 1486 aa18.64■□□□□ 0.57
SMYD3-IT1-201ENST00000426929 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
SMYD3-IT1-201ENST00000426929 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
SMYD3-IT1-201ENST00000426929 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
SMYD3-IT1-201ENST00000426929 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
SMYD3-IT1-201ENST00000426929 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.56
SMYD3-IT1-201ENST00000426929 NESP48681 1621 aa18.45■□□□□ 0.54
SMYD3-IT1-201ENST00000426929 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
SMYD3-IT1-201ENST00000426929 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
SMYD3-IT1-201ENST00000426929 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
SMYD3-IT1-201ENST00000426929 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
SMYD3-IT1-201ENST00000426929 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
SMYD3-IT1-201ENST00000426929 WIZO95785 1651 aa18.22■□□□□ 0.51
SMYD3-IT1-201ENST00000426929 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
SMYD3-IT1-201ENST00000426929 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
SMYD3-IT1-201ENST00000426929 WDR62O43379 1518 aa18.12■□□□□ 0.49
SMYD3-IT1-201ENST00000426929 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
SMYD3-IT1-201ENST00000426929 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
SMYD3-IT1-201ENST00000426929 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
SMYD3-IT1-201ENST00000426929 CFTRP13569 1480 aa18■□□□□ 0.47
SMYD3-IT1-201ENST00000426929 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
SMYD3-IT1-201ENST00000426929 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
SMYD3-IT1-201ENST00000426929 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
SMYD3-IT1-201ENST00000426929 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SMYD3-IT1-201ENST00000426929 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
SMYD3-IT1-201ENST00000426929 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
SMYD3-IT1-201ENST00000426929 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
SMYD3-IT1-201ENST00000426929 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
SMYD3-IT1-201ENST00000426929 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
SMYD3-IT1-201ENST00000426929 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
SMYD3-IT1-201ENST00000426929 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
SMYD3-IT1-201ENST00000426929 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
SMYD3-IT1-201ENST00000426929 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
SMYD3-IT1-201ENST00000426929 CHD1O14646 1710 aa17.45■□□□□ 0.38
SMYD3-IT1-201ENST00000426929 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
SMYD3-IT1-201ENST00000426929 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMYD3-IT1-201ENST00000426929 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
SMYD3-IT1-201ENST00000426929 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
SMYD3-IT1-201ENST00000426929 CUX1P39880 1505 aa17.34■□□□□ 0.37
SMYD3-IT1-201ENST00000426929 SOGA1O94964 1423 aa17.33■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
SMYD3-IT1-201ENST00000426929 GRIN2BQ13224 1484 aa17.25■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 FBLN2P98095 1184 aa17.23■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
SMYD3-IT1-201ENST00000426929 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
SMYD3-IT1-201ENST00000426929 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
SMYD3-IT1-201ENST00000426929 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
SMYD3-IT1-201ENST00000426929 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
SMYD3-IT1-201ENST00000426929 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
SMYD3-IT1-201ENST00000426929 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
SMYD3-IT1-201ENST00000426929 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
SMYD3-IT1-201ENST00000426929 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
SMYD3-IT1-201ENST00000426929 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
SMYD3-IT1-201ENST00000426929 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
SMYD3-IT1-201ENST00000426929 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
SMYD3-IT1-201ENST00000426929 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
SMYD3-IT1-201ENST00000426929 CEP170Q5SW79 1584 aa16.99■□□□□ 0.31
SMYD3-IT1-201ENST00000426929 NUP160Q12769 1436 aa16.99■□□□□ 0.31
SMYD3-IT1-201ENST00000426929 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
SMYD3-IT1-201ENST00000426929 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
SMYD3-IT1-201ENST00000426929 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
SMYD3-IT1-201ENST00000426929 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
SMYD3-IT1-201ENST00000426929 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms