RNA–Protein interactions for RNA: ENST00000426643.1

HCG23-205, Transcript of HLA complex group 23, humanhuman

TSL 3 BASIC

Gene HCG23, Length 610 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG23-205ENST00000426643 NISCHQ9Y2I1 1504 aa25.26■■□□□ 1.63
HCG23-205ENST00000426643 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
HCG23-205ENST00000426643 ABCC9O60706 1549 aa22.39■■□□□ 1.17
HCG23-205ENST00000426643 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
HCG23-205ENST00000426643 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
HCG23-205ENST00000426643 NACADO15069 1562 aa21.18■□□□□ 0.98
HCG23-205ENST00000426643 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
HCG23-205ENST00000426643 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
HCG23-205ENST00000426643 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
HCG23-205ENST00000426643 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
HCG23-205ENST00000426643 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
HCG23-205ENST00000426643 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
HCG23-205ENST00000426643 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
HCG23-205ENST00000426643 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
HCG23-205ENST00000426643 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
HCG23-205ENST00000426643 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
HCG23-205ENST00000426643 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
HCG23-205ENST00000426643 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
HCG23-205ENST00000426643 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
HCG23-205ENST00000426643 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
HCG23-205ENST00000426643 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
HCG23-205ENST00000426643 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
HCG23-205ENST00000426643 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
HCG23-205ENST00000426643 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
HCG23-205ENST00000426643 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.71
HCG23-205ENST00000426643 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
HCG23-205ENST00000426643 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
HCG23-205ENST00000426643 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
HCG23-205ENST00000426643 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
HCG23-205ENST00000426643 NESP48681 1621 aa19.36■□□□□ 0.69
HCG23-205ENST00000426643 WIZO95785 1651 aa19.32■□□□□ 0.68
HCG23-205ENST00000426643 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
HCG23-205ENST00000426643 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
HCG23-205ENST00000426643 LAMC3Q9Y6N6 1575 aa19.07■□□□□ 0.64
HCG23-205ENST00000426643 CUX2O14529 1486 aa19.05■□□□□ 0.64
HCG23-205ENST00000426643 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
HCG23-205ENST00000426643 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
HCG23-205ENST00000426643 THOC2Q8NI27 1593 aaKnown RBP19.02■□□□□ 0.64
HCG23-205ENST00000426643 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
HCG23-205ENST00000426643 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
HCG23-205ENST00000426643 CFTRP13569 1480 aa18.87■□□□□ 0.61
HCG23-205ENST00000426643 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
HCG23-205ENST00000426643 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
HCG23-205ENST00000426643 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
HCG23-205ENST00000426643 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
HCG23-205ENST00000426643 WDR62O43379 1518 aa18.78■□□□□ 0.6
HCG23-205ENST00000426643 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
HCG23-205ENST00000426643 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
HCG23-205ENST00000426643 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
HCG23-205ENST00000426643 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
HCG23-205ENST00000426643 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
HCG23-205ENST00000426643 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
HCG23-205ENST00000426643 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
HCG23-205ENST00000426643 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
HCG23-205ENST00000426643 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
HCG23-205ENST00000426643 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
HCG23-205ENST00000426643 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
HCG23-205ENST00000426643 CUX1P39880 1505 aa18.33■□□□□ 0.53
HCG23-205ENST00000426643 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
HCG23-205ENST00000426643 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.52
HCG23-205ENST00000426643 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
HCG23-205ENST00000426643 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
HCG23-205ENST00000426643 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
HCG23-205ENST00000426643 SOGA1O94964 1423 aa18.24■□□□□ 0.51
HCG23-205ENST00000426643 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
HCG23-205ENST00000426643 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
HCG23-205ENST00000426643 CHD1O14646 1710 aa18.14■□□□□ 0.49
HCG23-205ENST00000426643 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
HCG23-205ENST00000426643 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
HCG23-205ENST00000426643 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
HCG23-205ENST00000426643 FBLN2P98095 1184 aa18.08■□□□□ 0.48
HCG23-205ENST00000426643 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
HCG23-205ENST00000426643 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
HCG23-205ENST00000426643 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
HCG23-205ENST00000426643 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
HCG23-205ENST00000426643 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
HCG23-205ENST00000426643 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
HCG23-205ENST00000426643 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
HCG23-205ENST00000426643 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
HCG23-205ENST00000426643 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
HCG23-205ENST00000426643 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
HCG23-205ENST00000426643 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
HCG23-205ENST00000426643 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
HCG23-205ENST00000426643 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
HCG23-205ENST00000426643 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
HCG23-205ENST00000426643 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
HCG23-205ENST00000426643 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
HCG23-205ENST00000426643 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
HCG23-205ENST00000426643 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
HCG23-205ENST00000426643 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
HCG23-205ENST00000426643 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
HCG23-205ENST00000426643 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
HCG23-205ENST00000426643 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
HCG23-205ENST00000426643 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
HCG23-205ENST00000426643 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
HCG23-205ENST00000426643 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.43
HCG23-205ENST00000426643 NUP160Q12769 1436 aa17.76■□□□□ 0.43
HCG23-205ENST00000426643 IGF1RP08069 1367 aa17.71■□□□□ 0.43
HCG23-205ENST00000426643 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
HCG23-205ENST00000426643 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms