RNA–Protein interactions for RNA: ENST00000425838.5

FGB-202, Transcript of fibrinogen beta chain, humanhuman

TSL 4

Gene FGB, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGB-202ENST00000425838 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
FGB-202ENST00000425838 ABCC9O60706 1549 aa24.57■■□□□ 1.52
FGB-202ENST00000425838 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
FGB-202ENST00000425838 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
FGB-202ENST00000425838 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
FGB-202ENST00000425838 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
FGB-202ENST00000425838 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
FGB-202ENST00000425838 NACADO15069 1562 aa22.89■■□□□ 1.26
FGB-202ENST00000425838 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
FGB-202ENST00000425838 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
FGB-202ENST00000425838 UNC13AQ9UPW8 1703 aa22.75■■□□□ 1.23
FGB-202ENST00000425838 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
FGB-202ENST00000425838 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
FGB-202ENST00000425838 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
FGB-202ENST00000425838 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
FGB-202ENST00000425838 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
FGB-202ENST00000425838 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
FGB-202ENST00000425838 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
FGB-202ENST00000425838 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
FGB-202ENST00000425838 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
FGB-202ENST00000425838 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
FGB-202ENST00000425838 CUX2O14529 1486 aa21.32■■□□□ 1
FGB-202ENST00000425838 ERCC6Q03468 1493 aa21.29■■□□□ 1
FGB-202ENST00000425838 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
FGB-202ENST00000425838 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
FGB-202ENST00000425838 NESP48681 1621 aa20.96■□□□□ 0.95
FGB-202ENST00000425838 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
FGB-202ENST00000425838 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
FGB-202ENST00000425838 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
FGB-202ENST00000425838 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
FGB-202ENST00000425838 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
FGB-202ENST00000425838 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
FGB-202ENST00000425838 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
FGB-202ENST00000425838 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
FGB-202ENST00000425838 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
FGB-202ENST00000425838 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
FGB-202ENST00000425838 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
FGB-202ENST00000425838 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
FGB-202ENST00000425838 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
FGB-202ENST00000425838 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
FGB-202ENST00000425838 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
FGB-202ENST00000425838 WDR62O43379 1518 aa20.45■□□□□ 0.86
FGB-202ENST00000425838 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
FGB-202ENST00000425838 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
FGB-202ENST00000425838 WIZO95785 1651 aa20.32■□□□□ 0.84
FGB-202ENST00000425838 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
FGB-202ENST00000425838 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
FGB-202ENST00000425838 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
FGB-202ENST00000425838 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
FGB-202ENST00000425838 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
FGB-202ENST00000425838 CFTRP13569 1480 aa20.11■□□□□ 0.81
FGB-202ENST00000425838 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
FGB-202ENST00000425838 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
FGB-202ENST00000425838 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
FGB-202ENST00000425838 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
FGB-202ENST00000425838 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
FGB-202ENST00000425838 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
FGB-202ENST00000425838 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
FGB-202ENST00000425838 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
FGB-202ENST00000425838 CHD1O14646 1710 aa19.86■□□□□ 0.77
FGB-202ENST00000425838 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
FGB-202ENST00000425838 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
FGB-202ENST00000425838 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
FGB-202ENST00000425838 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
FGB-202ENST00000425838 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
FGB-202ENST00000425838 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
FGB-202ENST00000425838 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
FGB-202ENST00000425838 FBLN2P98095 1184 aa19.73■□□□□ 0.75
FGB-202ENST00000425838 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.74
FGB-202ENST00000425838 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
FGB-202ENST00000425838 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
FGB-202ENST00000425838 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
FGB-202ENST00000425838 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
FGB-202ENST00000425838 SYNJ1O43426 1573 aa19.52■□□□□ 0.71
FGB-202ENST00000425838 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
FGB-202ENST00000425838 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
FGB-202ENST00000425838 SOGA1O94964 1423 aa19.49■□□□□ 0.71
FGB-202ENST00000425838 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
FGB-202ENST00000425838 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
FGB-202ENST00000425838 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
FGB-202ENST00000425838 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
FGB-202ENST00000425838 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
FGB-202ENST00000425838 FOXD1Q16676 465 aa19.38■□□□□ 0.69
FGB-202ENST00000425838 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
FGB-202ENST00000425838 SYNJ2O15056 1496 aa19.36■□□□□ 0.69
FGB-202ENST00000425838 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
FGB-202ENST00000425838 CUX1P39880 1505 aa19.31■□□□□ 0.68
FGB-202ENST00000425838 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
FGB-202ENST00000425838 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
FGB-202ENST00000425838 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
FGB-202ENST00000425838 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
FGB-202ENST00000425838 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
FGB-202ENST00000425838 KIF13AQ9H1H9 1805 aa19.12■□□□□ 0.65
FGB-202ENST00000425838 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
FGB-202ENST00000425838 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
FGB-202ENST00000425838 NUP160Q12769 1436 aa19.03■□□□□ 0.64
FGB-202ENST00000425838 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
FGB-202ENST00000425838 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
FGB-202ENST00000425838 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
FGB-202ENST00000425838 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms