RNA–Protein interactions for RNA: ENST00000424545.2

ARFRP1-201, Transcript of ADP ribosylation factor related protein 1, humanhuman

TSL 2

Gene ARFRP1, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFRP1-201ENST00000424545 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
ARFRP1-201ENST00000424545 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
ARFRP1-201ENST00000424545 ABCC9O60706 1549 aa15.33■□□□□ 0.04
ARFRP1-201ENST00000424545 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
ARFRP1-201ENST00000424545 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
ARFRP1-201ENST00000424545 NACADO15069 1562 aa14.53□□□□□ -0.08
ARFRP1-201ENST00000424545 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
ARFRP1-201ENST00000424545 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
ARFRP1-201ENST00000424545 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
ARFRP1-201ENST00000424545 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
ARFRP1-201ENST00000424545 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
ARFRP1-201ENST00000424545 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
ARFRP1-201ENST00000424545 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
ARFRP1-201ENST00000424545 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
ARFRP1-201ENST00000424545 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
ARFRP1-201ENST00000424545 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
ARFRP1-201ENST00000424545 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
ARFRP1-201ENST00000424545 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
ARFRP1-201ENST00000424545 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
ARFRP1-201ENST00000424545 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
ARFRP1-201ENST00000424545 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
ARFRP1-201ENST00000424545 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
ARFRP1-201ENST00000424545 CUX2O14529 1486 aa13.36□□□□□ -0.27
ARFRP1-201ENST00000424545 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
ARFRP1-201ENST00000424545 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
ARFRP1-201ENST00000424545 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
ARFRP1-201ENST00000424545 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
ARFRP1-201ENST00000424545 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
ARFRP1-201ENST00000424545 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
ARFRP1-201ENST00000424545 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
ARFRP1-201ENST00000424545 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
ARFRP1-201ENST00000424545 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
ARFRP1-201ENST00000424545 NESP48681 1621 aa13.12□□□□□ -0.31
ARFRP1-201ENST00000424545 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
ARFRP1-201ENST00000424545 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
ARFRP1-201ENST00000424545 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
ARFRP1-201ENST00000424545 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
ARFRP1-201ENST00000424545 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
ARFRP1-201ENST00000424545 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
ARFRP1-201ENST00000424545 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
ARFRP1-201ENST00000424545 WDR62O43379 1518 aa12.88□□□□□ -0.35
ARFRP1-201ENST00000424545 WIZO95785 1651 aa12.86□□□□□ -0.35
ARFRP1-201ENST00000424545 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
ARFRP1-201ENST00000424545 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
ARFRP1-201ENST00000424545 CFTRP13569 1480 aa12.79□□□□□ -0.36
ARFRP1-201ENST00000424545 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
ARFRP1-201ENST00000424545 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
ARFRP1-201ENST00000424545 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
ARFRP1-201ENST00000424545 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
ARFRP1-201ENST00000424545 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
ARFRP1-201ENST00000424545 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
ARFRP1-201ENST00000424545 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
ARFRP1-201ENST00000424545 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
ARFRP1-201ENST00000424545 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
ARFRP1-201ENST00000424545 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
ARFRP1-201ENST00000424545 TOPBP1Q92547 1522 aa12.53□□□□□ -0.4
ARFRP1-201ENST00000424545 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
ARFRP1-201ENST00000424545 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
ARFRP1-201ENST00000424545 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
ARFRP1-201ENST00000424545 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
ARFRP1-201ENST00000424545 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
ARFRP1-201ENST00000424545 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
ARFRP1-201ENST00000424545 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
ARFRP1-201ENST00000424545 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
ARFRP1-201ENST00000424545 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
ARFRP1-201ENST00000424545 CHD1O14646 1710 aa12.4□□□□□ -0.42
ARFRP1-201ENST00000424545 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.431e-7■■■□□ 16.7
ARFRP1-201ENST00000424545 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
ARFRP1-201ENST00000424545 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
ARFRP1-201ENST00000424545 SOGA1O94964 1423 aa12.35□□□□□ -0.43
ARFRP1-201ENST00000424545 FBLN2P98095 1184 aa12.32□□□□□ -0.44
ARFRP1-201ENST00000424545 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
ARFRP1-201ENST00000424545 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
ARFRP1-201ENST00000424545 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
ARFRP1-201ENST00000424545 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
ARFRP1-201ENST00000424545 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
ARFRP1-201ENST00000424545 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
ARFRP1-201ENST00000424545 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
ARFRP1-201ENST00000424545 GRIN2BQ13224 1484 aa12.27□□□□□ -0.44
ARFRP1-201ENST00000424545 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.44
ARFRP1-201ENST00000424545 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
ARFRP1-201ENST00000424545 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
ARFRP1-201ENST00000424545 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
ARFRP1-201ENST00000424545 CUX1P39880 1505 aa12.25□□□□□ -0.45
ARFRP1-201ENST00000424545 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
ARFRP1-201ENST00000424545 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
ARFRP1-201ENST00000424545 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
ARFRP1-201ENST00000424545 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
ARFRP1-201ENST00000424545 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
ARFRP1-201ENST00000424545 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
ARFRP1-201ENST00000424545 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
ARFRP1-201ENST00000424545 FOXD1Q16676 465 aa12.08□□□□□ -0.48
ARFRP1-201ENST00000424545 NUP160Q12769 1436 aa12.08□□□□□ -0.48
ARFRP1-201ENST00000424545 ADAMTS12P58397 1594 aa12.07□□□□□ -0.48
ARFRP1-201ENST00000424545 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
ARFRP1-201ENST00000424545 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
ARFRP1-201ENST00000424545 SHROOM2Q13796 1616 aa12.05□□□□□ -0.48
ARFRP1-201ENST00000424545 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
ARFRP1-201ENST00000424545 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
ARFRP1-201ENST00000424545 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms