RNA–Protein interactions for RNA: ENST00000423956.5

RAD50-203, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-203ENST00000423956 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
RAD50-203ENST00000423956 CHIC1Q5VXU3 224 aa11□□□□□ -0.65
RAD50-203ENST00000423956 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
RAD50-203ENST00000423956 CCDC180Q9P1Z9 1646 aa9.72□□□□□ -0.85
RAD50-203ENST00000423956 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.87
RAD50-203ENST00000423956 ABCC9O60706 1549 aa9.63□□□□□ -0.87
RAD50-203ENST00000423956 PHF23Q9BUL5 403 aaPredicted RBP9.61□□□□□ -0.87
RAD50-203ENST00000423956 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
RAD50-203ENST00000423956 NACADO15069 1562 aa9.21□□□□□ -0.94
RAD50-203ENST00000423956 DNAJC5BQ9UF47 199 aa9.14□□□□□ -0.95
RAD50-203ENST00000423956 MYO15BQ96JP2 1530 aa9.12□□□□□ -0.95
RAD50-203ENST00000423956 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
RAD50-203ENST00000423956 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
RAD50-203ENST00000423956 UNC13AQ9UPW8 1703 aa8.98□□□□□ -0.97
RAD50-203ENST00000423956 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
RAD50-203ENST00000423956 FOXD1Q16676 465 aa8.91□□□□□ -0.98
RAD50-203ENST00000423956 DCAF1Q9Y4B6 1507 aa8.87□□□□□ -0.99
RAD50-203ENST00000423956 PLPPR3Q6T4P5 718 aa8.86□□□□□ -0.99
RAD50-203ENST00000423956 PABPN1Q86U42 306 aaKnown RBP eCLIP8.82□□□□□ -1
RAD50-203ENST00000423956 CC2D2AQ9P2K1 1620 aa8.79□□□□□ -1
RAD50-203ENST00000423956 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
RAD50-203ENST00000423956 EIF4G1Q04637 1599 aaKnown RBP8.75□□□□□ -1.01
RAD50-203ENST00000423956 DNAJC5Q9H3Z4 198 aa8.74□□□□□ -1.01
RAD50-203ENST00000423956 ZCCHC6Q5VYS8 1495 aaKnown RBP8.72□□□□□ -1.01
RAD50-203ENST00000423956 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
RAD50-203ENST00000423956 CUX2O14529 1486 aa8.64□□□□□ -1.03
RAD50-203ENST00000423956 SCRIBQ14160 1630 aa8.58□□□□□ -1.04
RAD50-203ENST00000423956 NCAPD3P42695 1498 aa8.46□□□□□ -1.06
RAD50-203ENST00000423956 PPP6R1Q9UPN7 881 aa8.45□□□□□ -1.06
RAD50-203ENST00000423956 HMGXB3Q12766 1538 aa8.42□□□□□ -1.06
RAD50-203ENST00000423956 ADRA2BP18089 450 aa8.41□□□□□ -1.06
RAD50-203ENST00000423956 ERCC6Q03468 1493 aa8.4□□□□□ -1.06
RAD50-203ENST00000423956 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
RAD50-203ENST00000423956 MSH5O43196 834 aa8.33□□□□□ -1.08
RAD50-203ENST00000423956 LAMC3Q9Y6N6 1575 aa8.33□□□□□ -1.08
RAD50-203ENST00000423956 THOC2Q8NI27 1593 aaKnown RBP8.32□□□□□ -1.08
RAD50-203ENST00000423956 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
RAD50-203ENST00000423956 PIAS4Q8N2W9 510 aaPredicted RBP8.32□□□□□ -1.08
RAD50-203ENST00000423956 PEG3Q9GZU2 1588 aa8.32□□□□□ -1.08
RAD50-203ENST00000423956 SMARCA4P51532 1647 aa8.28□□□□□ -1.08
RAD50-203ENST00000423956 BAZ1AQ9NRL2 1556 aaPredicted RBP8.25□□□□□ -1.09
RAD50-203ENST00000423956 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
RAD50-203ENST00000423956 BAZ1BQ9UIG0 1483 aaKnown RBP8.23□□□□□ -1.09
RAD50-203ENST00000423956 WDR62O43379 1518 aa8.19□□□□□ -1.1
RAD50-203ENST00000423956 NESP48681 1621 aa8.18□□□□□ -1.1
RAD50-203ENST00000423956 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
RAD50-203ENST00000423956 KIF21AQ7Z4S6 1674 aa8.17□□□□□ -1.1
RAD50-203ENST00000423956 CADPSQ9ULU8 1353 aa8.12□□□□□ -1.11
RAD50-203ENST00000423956 CEP164Q9UPV0 1460 aa8.07□□□□□ -1.12
RAD50-203ENST00000423956 TRIM41Q8WV44 630 aa8.06□□□□□ -1.12
RAD50-203ENST00000423956 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
RAD50-203ENST00000423956 MROH2BQ7Z745 1585 aa8.03□□□□□ -1.12
RAD50-203ENST00000423956 CFTRP13569 1480 aa8.01□□□□□ -1.13
RAD50-203ENST00000423956 PRDM2Q13029 1718 aa8.01□□□□□ -1.13
RAD50-203ENST00000423956 FANCD2Q9BXW9 1451 aa8.01□□□□□ -1.13
RAD50-203ENST00000423956 RIMBP3CA6NJZ7 1639 aa7.99□□□□□ -1.13
RAD50-203ENST00000423956 RIMBP3BA6NNM3 1639 aa7.99□□□□□ -1.13
RAD50-203ENST00000423956 RIMBP3Q9UFD9 1639 aa7.99□□□□□ -1.13
RAD50-203ENST00000423956 IFT140Q96RY7 1462 aa7.97□□□□□ -1.13
RAD50-203ENST00000423956 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
RAD50-203ENST00000423956 ARHGEF11O15085 1522 aa7.94□□□□□ -1.14
RAD50-203ENST00000423956 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
RAD50-203ENST00000423956 RSF1Q96T23 1441 aaPredicted RBP7.94□□□□□ -1.14
RAD50-203ENST00000423956 URB2Q14146 1524 aaKnown RBP7.93□□□□□ -1.14
RAD50-203ENST00000423956 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
RAD50-203ENST00000423956 WIZO95785 1651 aa7.9□□□□□ -1.14
RAD50-203ENST00000423956 EIF4G3O43432 1585 aaKnown RBP7.85□□□□□ -1.15
RAD50-203ENST00000423956 DNMBPQ6XZF7 1577 aa7.85□□□□□ -1.15
RAD50-203ENST00000423956 TOPBP1Q92547 1522 aa7.84□□□□□ -1.15
RAD50-203ENST00000423956 ARAP1Q96P48 1450 aa7.83□□□□□ -1.16
RAD50-203ENST00000423956 CHD1O14646 1710 aa7.82□□□□□ -1.16
RAD50-203ENST00000423956 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
RAD50-203ENST00000423956 SCAF1Q9H7N4 1312 aaKnown RBP7.81□□□□□ -1.16
RAD50-203ENST00000423956 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
RAD50-203ENST00000423956 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
RAD50-203ENST00000423956 SYNJ1O43426 1573 aa7.79□□□□□ -1.16
RAD50-203ENST00000423956 MAGI1Q96QZ7 1491 aaPredicted RBP7.77□□□□□ -1.17
RAD50-203ENST00000423956 PPP4R3CPQ6ZMV5 832 aa7.77□□□□□ -1.17
RAD50-203ENST00000423956 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
RAD50-203ENST00000423956 CCDC88BA6NC98 1476 aa7.73□□□□□ -1.17
RAD50-203ENST00000423956 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
RAD50-203ENST00000423956 TRHP20396 242 aaPredicted RBP7.72□□□□□ -1.17
RAD50-203ENST00000423956 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
RAD50-203ENST00000423956 DMRT2Q9Y5R5 561 aa7.71□□□□□ -1.18
RAD50-203ENST00000423956 GRIN2BQ13224 1484 aa7.7□□□□□ -1.18
RAD50-203ENST00000423956 AQRO60306 1485 aaKnown RBP eCLIP7.69□□□□□ -1.189e-10■■■■■ 36.7
RAD50-203ENST00000423956 SNAPC4Q5SXM2 1469 aa7.68□□□□□ -1.18
RAD50-203ENST00000423956 SOGA1O94964 1423 aa7.67□□□□□ -1.18
RAD50-203ENST00000423956 GAPVD1Q14C86 1478 aa7.66□□□□□ -1.18
RAD50-203ENST00000423956 PBRM1Q86U86 1689 aa7.65□□□□□ -1.19
RAD50-203ENST00000423956 MAPK8IP2Q13387 824 aaPredicted RBP7.64□□□□□ -1.19
RAD50-203ENST00000423956 SHROOM2Q13796 1616 aa7.63□□□□□ -1.19
RAD50-203ENST00000423956 FGD5Q6ZNL6 1462 aa7.63□□□□□ -1.19
RAD50-203ENST00000423956 CNKSR2Q8WXI2 1034 aa7.63□□□□□ -1.19
RAD50-203ENST00000423956 ABCA5Q8WWZ7 1642 aa7.63□□□□□ -1.19
RAD50-203ENST00000423956 CHMP7Q8WUX9 453 aaPredicted RBP7.62□□□□□ -1.19
RAD50-203ENST00000423956 ABCA10Q8WWZ4 1543 aa7.61□□□□□ -1.19
RAD50-203ENST00000423956 NUP160Q12769 1436 aa7.61□□□□□ -1.19
RAD50-203ENST00000423956 RAD54L2Q9Y4B4 1467 aa7.6□□□□□ -1.19
RAD50-203ENST00000423956 FBLN2P98095 1184 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms