RNA–Protein interactions for RNA: ENST00000423045.2

PCBP3-207, Transcript of poly(rC) binding protein 3, humanhuman

TSL 2

Gene PCBP3, Length 1,183 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-207ENST00000423045 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
PCBP3-207ENST00000423045 ABCC9O60706 1549 aa16.71■□□□□ 0.27
PCBP3-207ENST00000423045 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.27
PCBP3-207ENST00000423045 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
PCBP3-207ENST00000423045 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
PCBP3-207ENST00000423045 NACADO15069 1562 aa15.85■□□□□ 0.13
PCBP3-207ENST00000423045 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
PCBP3-207ENST00000423045 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
PCBP3-207ENST00000423045 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
PCBP3-207ENST00000423045 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
PCBP3-207ENST00000423045 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
PCBP3-207ENST00000423045 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
PCBP3-207ENST00000423045 UNC13AQ9UPW8 1703 aa15.44■□□□□ 0.06
PCBP3-207ENST00000423045 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
PCBP3-207ENST00000423045 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
PCBP3-207ENST00000423045 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
PCBP3-207ENST00000423045 SCRIBQ14160 1630 aa15.21■□□□□ 0.02
PCBP3-207ENST00000423045 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
PCBP3-207ENST00000423045 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0
PCBP3-207ENST00000423045 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
PCBP3-207ENST00000423045 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
PCBP3-207ENST00000423045 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
PCBP3-207ENST00000423045 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
PCBP3-207ENST00000423045 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
PCBP3-207ENST00000423045 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
PCBP3-207ENST00000423045 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
PCBP3-207ENST00000423045 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
PCBP3-207ENST00000423045 CUX2O14529 1486 aa14.46□□□□□ -0.09
PCBP3-207ENST00000423045 DNAJC5Q9H3Z4 198 aa14.45□□□□□ -0.1
PCBP3-207ENST00000423045 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
PCBP3-207ENST00000423045 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
PCBP3-207ENST00000423045 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
PCBP3-207ENST00000423045 NESP48681 1621 aa14.34□□□□□ -0.11
PCBP3-207ENST00000423045 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
PCBP3-207ENST00000423045 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
PCBP3-207ENST00000423045 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
PCBP3-207ENST00000423045 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
PCBP3-207ENST00000423045 WIZO95785 1651 aa14.14□□□□□ -0.15
PCBP3-207ENST00000423045 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
PCBP3-207ENST00000423045 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
PCBP3-207ENST00000423045 SENP3Q9H4L4 574 aaPredicted RBP14.1□□□□□ -0.15
PCBP3-207ENST00000423045 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
PCBP3-207ENST00000423045 WDR62O43379 1518 aa14.05□□□□□ -0.16
PCBP3-207ENST00000423045 CFTRP13569 1480 aa14.04□□□□□ -0.16
PCBP3-207ENST00000423045 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
PCBP3-207ENST00000423045 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
PCBP3-207ENST00000423045 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
PCBP3-207ENST00000423045 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
PCBP3-207ENST00000423045 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
PCBP3-207ENST00000423045 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
PCBP3-207ENST00000423045 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
PCBP3-207ENST00000423045 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
PCBP3-207ENST00000423045 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
PCBP3-207ENST00000423045 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
PCBP3-207ENST00000423045 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
PCBP3-207ENST00000423045 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
PCBP3-207ENST00000423045 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
PCBP3-207ENST00000423045 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
PCBP3-207ENST00000423045 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
PCBP3-207ENST00000423045 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
PCBP3-207ENST00000423045 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
PCBP3-207ENST00000423045 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCBP3-207ENST00000423045 SOGA1O94964 1423 aa13.57□□□□□ -0.24
PCBP3-207ENST00000423045 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
PCBP3-207ENST00000423045 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
PCBP3-207ENST00000423045 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
PCBP3-207ENST00000423045 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
PCBP3-207ENST00000423045 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
PCBP3-207ENST00000423045 FBLN2P98095 1184 aa13.53□□□□□ -0.24
PCBP3-207ENST00000423045 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
PCBP3-207ENST00000423045 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
PCBP3-207ENST00000423045 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
PCBP3-207ENST00000423045 CUX1P39880 1505 aa13.49□□□□□ -0.25
PCBP3-207ENST00000423045 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
PCBP3-207ENST00000423045 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
PCBP3-207ENST00000423045 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
PCBP3-207ENST00000423045 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
PCBP3-207ENST00000423045 CHD1O14646 1710 aa13.45□□□□□ -0.26
PCBP3-207ENST00000423045 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
PCBP3-207ENST00000423045 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
PCBP3-207ENST00000423045 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
PCBP3-207ENST00000423045 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
PCBP3-207ENST00000423045 ARAP1Q96P48 1450 aa13.4□□□□□ -0.26
PCBP3-207ENST00000423045 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
PCBP3-207ENST00000423045 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
PCBP3-207ENST00000423045 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
PCBP3-207ENST00000423045 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
PCBP3-207ENST00000423045 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
PCBP3-207ENST00000423045 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
PCBP3-207ENST00000423045 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
PCBP3-207ENST00000423045 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
PCBP3-207ENST00000423045 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
PCBP3-207ENST00000423045 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
PCBP3-207ENST00000423045 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
PCBP3-207ENST00000423045 NUP160Q12769 1436 aa13.23□□□□□ -0.29
PCBP3-207ENST00000423045 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
PCBP3-207ENST00000423045 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
PCBP3-207ENST00000423045 CEP170Q5SW79 1584 aa13.17□□□□□ -0.3
PCBP3-207ENST00000423045 FOXD1Q16676 465 aa13.13□□□□□ -0.31
PCBP3-207ENST00000423045 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms