RNA–Protein interactions for RNA: ENST00000418127.5

SPO11-204, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

TSL 3

Gene SPO11, Length 810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-204ENST00000418127 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
SPO11-204ENST00000418127 ABCC9O60706 1549 aa27.95■■■□□ 2.06
SPO11-204ENST00000418127 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
SPO11-204ENST00000418127 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
SPO11-204ENST00000418127 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
SPO11-204ENST00000418127 NACADO15069 1562 aa26.36■■□□□ 1.81
SPO11-204ENST00000418127 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
SPO11-204ENST00000418127 UNC13AQ9UPW8 1703 aa26.07■■□□□ 1.76
SPO11-204ENST00000418127 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
SPO11-204ENST00000418127 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
SPO11-204ENST00000418127 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
SPO11-204ENST00000418127 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
SPO11-204ENST00000418127 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
SPO11-204ENST00000418127 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
SPO11-204ENST00000418127 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
SPO11-204ENST00000418127 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
SPO11-204ENST00000418127 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
SPO11-204ENST00000418127 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
SPO11-204ENST00000418127 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
SPO11-204ENST00000418127 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
SPO11-204ENST00000418127 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
SPO11-204ENST00000418127 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
SPO11-204ENST00000418127 CUX2O14529 1486 aa24.21■■□□□ 1.47
SPO11-204ENST00000418127 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
SPO11-204ENST00000418127 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
SPO11-204ENST00000418127 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
SPO11-204ENST00000418127 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
SPO11-204ENST00000418127 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
SPO11-204ENST00000418127 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
SPO11-204ENST00000418127 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
SPO11-204ENST00000418127 NESP48681 1621 aa23.95■■□□□ 1.42
SPO11-204ENST00000418127 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
SPO11-204ENST00000418127 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
SPO11-204ENST00000418127 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
SPO11-204ENST00000418127 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
SPO11-204ENST00000418127 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
SPO11-204ENST00000418127 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
SPO11-204ENST00000418127 WIZO95785 1651 aa23.53■■□□□ 1.36
SPO11-204ENST00000418127 CADPSQ9ULU8 1353 aa23.51■■□□□ 1.35
SPO11-204ENST00000418127 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
SPO11-204ENST00000418127 WDR62O43379 1518 aa23.44■■□□□ 1.34
SPO11-204ENST00000418127 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
SPO11-204ENST00000418127 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
SPO11-204ENST00000418127 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
SPO11-204ENST00000418127 CFTRP13569 1480 aa23.23■■□□□ 1.31
SPO11-204ENST00000418127 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
SPO11-204ENST00000418127 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
SPO11-204ENST00000418127 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
SPO11-204ENST00000418127 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
SPO11-204ENST00000418127 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
SPO11-204ENST00000418127 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
SPO11-204ENST00000418127 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
SPO11-204ENST00000418127 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
SPO11-204ENST00000418127 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
SPO11-204ENST00000418127 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
SPO11-204ENST00000418127 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
SPO11-204ENST00000418127 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
SPO11-204ENST00000418127 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
SPO11-204ENST00000418127 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
SPO11-204ENST00000418127 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
SPO11-204ENST00000418127 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
SPO11-204ENST00000418127 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
SPO11-204ENST00000418127 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
SPO11-204ENST00000418127 CHD1O14646 1710 aa22.68■■□□□ 1.22
SPO11-204ENST00000418127 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
SPO11-204ENST00000418127 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
SPO11-204ENST00000418127 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPO11-204ENST00000418127 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
SPO11-204ENST00000418127 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
SPO11-204ENST00000418127 FBLN2P98095 1184 aa22.45■■□□□ 1.18
SPO11-204ENST00000418127 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
SPO11-204ENST00000418127 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
SPO11-204ENST00000418127 SOGA1O94964 1423 aa22.43■■□□□ 1.18
SPO11-204ENST00000418127 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
SPO11-204ENST00000418127 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
SPO11-204ENST00000418127 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
SPO11-204ENST00000418127 CUX1P39880 1505 aa22.36■■□□□ 1.17
SPO11-204ENST00000418127 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
SPO11-204ENST00000418127 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
SPO11-204ENST00000418127 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
SPO11-204ENST00000418127 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
SPO11-204ENST00000418127 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
SPO11-204ENST00000418127 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
SPO11-204ENST00000418127 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
SPO11-204ENST00000418127 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
SPO11-204ENST00000418127 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
SPO11-204ENST00000418127 ABCA5Q8WWZ7 1642 aa22.19■■□□□ 1.14
SPO11-204ENST00000418127 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
SPO11-204ENST00000418127 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
SPO11-204ENST00000418127 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
SPO11-204ENST00000418127 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
SPO11-204ENST00000418127 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
SPO11-204ENST00000418127 TOP2BQ02880 1626 aa22■■□□□ 1.11
SPO11-204ENST00000418127 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
SPO11-204ENST00000418127 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
SPO11-204ENST00000418127 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
SPO11-204ENST00000418127 NUP160Q12769 1436 aa21.94■■□□□ 1.1
SPO11-204ENST00000418127 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
SPO11-204ENST00000418127 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
SPO11-204ENST00000418127 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms