RNA–Protein interactions for RNA: ENST00000417784.5

PARL-203, Transcript of presenilin associated rhomboid like, humanhuman

TSL 3

Gene PARL, Length 722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARL-203ENST00000417784 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
PARL-203ENST00000417784 ABCC9O60706 1549 aa23.74■■□□□ 1.39
PARL-203ENST00000417784 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
PARL-203ENST00000417784 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
PARL-203ENST00000417784 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
PARL-203ENST00000417784 NACADO15069 1562 aa22.2■■□□□ 1.14
PARL-203ENST00000417784 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.14
PARL-203ENST00000417784 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
PARL-203ENST00000417784 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
PARL-203ENST00000417784 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
PARL-203ENST00000417784 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
PARL-203ENST00000417784 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
PARL-203ENST00000417784 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
PARL-203ENST00000417784 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
PARL-203ENST00000417784 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
PARL-203ENST00000417784 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
PARL-203ENST00000417784 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
PARL-203ENST00000417784 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
PARL-203ENST00000417784 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
PARL-203ENST00000417784 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
PARL-203ENST00000417784 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
PARL-203ENST00000417784 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
PARL-203ENST00000417784 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
PARL-203ENST00000417784 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
PARL-203ENST00000417784 NESP48681 1621 aa20.42■□□□□ 0.86
PARL-203ENST00000417784 CUX2O14529 1486 aa20.41■□□□□ 0.86
PARL-203ENST00000417784 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
PARL-203ENST00000417784 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
PARL-203ENST00000417784 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
PARL-203ENST00000417784 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
PARL-203ENST00000417784 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
PARL-203ENST00000417784 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
PARL-203ENST00000417784 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
PARL-203ENST00000417784 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
PARL-203ENST00000417784 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
PARL-203ENST00000417784 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
PARL-203ENST00000417784 WIZO95785 1651 aa19.97■□□□□ 0.79
PARL-203ENST00000417784 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
PARL-203ENST00000417784 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
PARL-203ENST00000417784 WDR62O43379 1518 aa19.82■□□□□ 0.76
PARL-203ENST00000417784 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
PARL-203ENST00000417784 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
PARL-203ENST00000417784 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
PARL-203ENST00000417784 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
PARL-203ENST00000417784 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
PARL-203ENST00000417784 CFTRP13569 1480 aa19.65■□□□□ 0.74
PARL-203ENST00000417784 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
PARL-203ENST00000417784 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
PARL-203ENST00000417784 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
PARL-203ENST00000417784 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
PARL-203ENST00000417784 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
PARL-203ENST00000417784 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
PARL-203ENST00000417784 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
PARL-203ENST00000417784 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
PARL-203ENST00000417784 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
PARL-203ENST00000417784 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
PARL-203ENST00000417784 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
PARL-203ENST00000417784 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
PARL-203ENST00000417784 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
PARL-203ENST00000417784 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
PARL-203ENST00000417784 CHD1O14646 1710 aa19.21■□□□□ 0.67
PARL-203ENST00000417784 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
PARL-203ENST00000417784 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
PARL-203ENST00000417784 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
PARL-203ENST00000417784 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
PARL-203ENST00000417784 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
PARL-203ENST00000417784 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
PARL-203ENST00000417784 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
PARL-203ENST00000417784 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
PARL-203ENST00000417784 CUX1P39880 1505 aa18.97■□□□□ 0.63
PARL-203ENST00000417784 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
PARL-203ENST00000417784 SOGA1O94964 1423 aa18.95■□□□□ 0.62
PARL-203ENST00000417784 FBLN2P98095 1184 aa18.95■□□□□ 0.62
PARL-203ENST00000417784 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
PARL-203ENST00000417784 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
PARL-203ENST00000417784 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
PARL-203ENST00000417784 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
PARL-203ENST00000417784 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
PARL-203ENST00000417784 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
PARL-203ENST00000417784 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
PARL-203ENST00000417784 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
PARL-203ENST00000417784 SYNJ2O15056 1496 aa18.77■□□□□ 0.59
PARL-203ENST00000417784 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
PARL-203ENST00000417784 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
PARL-203ENST00000417784 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
PARL-203ENST00000417784 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
PARL-203ENST00000417784 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
PARL-203ENST00000417784 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
PARL-203ENST00000417784 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
PARL-203ENST00000417784 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
PARL-203ENST00000417784 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
PARL-203ENST00000417784 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
PARL-203ENST00000417784 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
PARL-203ENST00000417784 NUP160Q12769 1436 aa18.57■□□□□ 0.56
PARL-203ENST00000417784 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
PARL-203ENST00000417784 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
PARL-203ENST00000417784 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
PARL-203ENST00000417784 KIF13AQ9H1H9 1805 aa18.48■□□□□ 0.55
PARL-203ENST00000417784 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
PARL-203ENST00000417784 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms