RNA–Protein interactions for RNA: ENST00000417432.1

CNOT4P1-201, Transcript of CCR4-NOT transcription complex subunit 4 pseudogene 1, humanhuman

BASIC

Gene CNOT4P1, Length 1,199 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4P1-201ENST00000417432 NISCHQ9Y2I1 1504 aa22.09■■□□□ 1.13
CNOT4P1-201ENST00000417432 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
CNOT4P1-201ENST00000417432 ABCC9O60706 1549 aa19.82■□□□□ 0.76
CNOT4P1-201ENST00000417432 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
CNOT4P1-201ENST00000417432 NACADO15069 1562 aa18.76■□□□□ 0.59
CNOT4P1-201ENST00000417432 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
CNOT4P1-201ENST00000417432 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
CNOT4P1-201ENST00000417432 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
CNOT4P1-201ENST00000417432 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
CNOT4P1-201ENST00000417432 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
CNOT4P1-201ENST00000417432 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
CNOT4P1-201ENST00000417432 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
CNOT4P1-201ENST00000417432 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
CNOT4P1-201ENST00000417432 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
CNOT4P1-201ENST00000417432 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
CNOT4P1-201ENST00000417432 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
CNOT4P1-201ENST00000417432 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
CNOT4P1-201ENST00000417432 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
CNOT4P1-201ENST00000417432 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
CNOT4P1-201ENST00000417432 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
CNOT4P1-201ENST00000417432 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
CNOT4P1-201ENST00000417432 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
CNOT4P1-201ENST00000417432 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
CNOT4P1-201ENST00000417432 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
CNOT4P1-201ENST00000417432 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
CNOT4P1-201ENST00000417432 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
CNOT4P1-201ENST00000417432 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
CNOT4P1-201ENST00000417432 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
CNOT4P1-201ENST00000417432 CUX2O14529 1486 aa17.1■□□□□ 0.33
CNOT4P1-201ENST00000417432 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
CNOT4P1-201ENST00000417432 NESP48681 1621 aa17.03■□□□□ 0.32
CNOT4P1-201ENST00000417432 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
CNOT4P1-201ENST00000417432 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
CNOT4P1-201ENST00000417432 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
CNOT4P1-201ENST00000417432 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
CNOT4P1-201ENST00000417432 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
CNOT4P1-201ENST00000417432 WIZO95785 1651 aa16.88■□□□□ 0.29
CNOT4P1-201ENST00000417432 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
CNOT4P1-201ENST00000417432 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
CNOT4P1-201ENST00000417432 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
CNOT4P1-201ENST00000417432 WDR62O43379 1518 aa16.67■□□□□ 0.26
CNOT4P1-201ENST00000417432 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
CNOT4P1-201ENST00000417432 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
CNOT4P1-201ENST00000417432 PRDM2Q13029 1718 aa16.63■□□□□ 0.25
CNOT4P1-201ENST00000417432 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
CNOT4P1-201ENST00000417432 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
CNOT4P1-201ENST00000417432 CFTRP13569 1480 aa16.55■□□□□ 0.24
CNOT4P1-201ENST00000417432 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
CNOT4P1-201ENST00000417432 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
CNOT4P1-201ENST00000417432 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
CNOT4P1-201ENST00000417432 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
CNOT4P1-201ENST00000417432 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
CNOT4P1-201ENST00000417432 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
CNOT4P1-201ENST00000417432 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
CNOT4P1-201ENST00000417432 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
CNOT4P1-201ENST00000417432 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
CNOT4P1-201ENST00000417432 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CNOT4P1-201ENST00000417432 CHD1O14646 1710 aa16.18■□□□□ 0.18
CNOT4P1-201ENST00000417432 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
CNOT4P1-201ENST00000417432 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
CNOT4P1-201ENST00000417432 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
CNOT4P1-201ENST00000417432 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
CNOT4P1-201ENST00000417432 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
CNOT4P1-201ENST00000417432 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
CNOT4P1-201ENST00000417432 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
CNOT4P1-201ENST00000417432 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
CNOT4P1-201ENST00000417432 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
CNOT4P1-201ENST00000417432 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
CNOT4P1-201ENST00000417432 CUX1P39880 1505 aa16.01■□□□□ 0.15
CNOT4P1-201ENST00000417432 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
CNOT4P1-201ENST00000417432 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
CNOT4P1-201ENST00000417432 SOGA1O94964 1423 aa15.98■□□□□ 0.15
CNOT4P1-201ENST00000417432 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
CNOT4P1-201ENST00000417432 FBLN2P98095 1184 aa15.94■□□□□ 0.14
CNOT4P1-201ENST00000417432 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
CNOT4P1-201ENST00000417432 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
CNOT4P1-201ENST00000417432 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
CNOT4P1-201ENST00000417432 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
CNOT4P1-201ENST00000417432 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
CNOT4P1-201ENST00000417432 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
CNOT4P1-201ENST00000417432 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
CNOT4P1-201ENST00000417432 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
CNOT4P1-201ENST00000417432 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
CNOT4P1-201ENST00000417432 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
CNOT4P1-201ENST00000417432 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
CNOT4P1-201ENST00000417432 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
CNOT4P1-201ENST00000417432 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
CNOT4P1-201ENST00000417432 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
CNOT4P1-201ENST00000417432 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
CNOT4P1-201ENST00000417432 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
CNOT4P1-201ENST00000417432 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
CNOT4P1-201ENST00000417432 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
CNOT4P1-201ENST00000417432 GRIN2AQ12879 1464 aa15.71■□□□□ 0.1
CNOT4P1-201ENST00000417432 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
CNOT4P1-201ENST00000417432 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
CNOT4P1-201ENST00000417432 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
CNOT4P1-201ENST00000417432 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
CNOT4P1-201ENST00000417432 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
CNOT4P1-201ENST00000417432 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
CNOT4P1-201ENST00000417432 NUP160Q12769 1436 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms