RNA–Protein interactions for RNA: ENST00000417400.1

CITED1-203, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 2

Gene CITED1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-203ENST00000417400 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CITED1-203ENST00000417400 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
CITED1-203ENST00000417400 ABCC9O60706 1549 aa15.84■□□□□ 0.13
CITED1-203ENST00000417400 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
CITED1-203ENST00000417400 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
CITED1-203ENST00000417400 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
CITED1-203ENST00000417400 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
CITED1-203ENST00000417400 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
CITED1-203ENST00000417400 NACADO15069 1562 aa14.81□□□□□ -0.04
CITED1-203ENST00000417400 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
CITED1-203ENST00000417400 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
CITED1-203ENST00000417400 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
CITED1-203ENST00000417400 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
CITED1-203ENST00000417400 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
CITED1-203ENST00000417400 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
CITED1-203ENST00000417400 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
CITED1-203ENST00000417400 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
CITED1-203ENST00000417400 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
CITED1-203ENST00000417400 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
CITED1-203ENST00000417400 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
CITED1-203ENST00000417400 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
CITED1-203ENST00000417400 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
CITED1-203ENST00000417400 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
CITED1-203ENST00000417400 CUX2O14529 1486 aa13.64□□□□□ -0.23
CITED1-203ENST00000417400 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
CITED1-203ENST00000417400 NESP48681 1621 aa13.61□□□□□ -0.23
CITED1-203ENST00000417400 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
CITED1-203ENST00000417400 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
CITED1-203ENST00000417400 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
CITED1-203ENST00000417400 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
CITED1-203ENST00000417400 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
CITED1-203ENST00000417400 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
CITED1-203ENST00000417400 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
CITED1-203ENST00000417400 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
CITED1-203ENST00000417400 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CITED1-203ENST00000417400 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
CITED1-203ENST00000417400 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
CITED1-203ENST00000417400 WIZO95785 1651 aa13.34□□□□□ -0.27
CITED1-203ENST00000417400 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
CITED1-203ENST00000417400 WDR62O43379 1518 aa13.23□□□□□ -0.29
CITED1-203ENST00000417400 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
CITED1-203ENST00000417400 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
CITED1-203ENST00000417400 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
CITED1-203ENST00000417400 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
CITED1-203ENST00000417400 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CITED1-203ENST00000417400 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
CITED1-203ENST00000417400 SENP3Q9H4L4 574 aaPredicted RBP13.1□□□□□ -0.31
CITED1-203ENST00000417400 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
CITED1-203ENST00000417400 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
CITED1-203ENST00000417400 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
CITED1-203ENST00000417400 CFTRP13569 1480 aa13.04□□□□□ -0.32
CITED1-203ENST00000417400 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
CITED1-203ENST00000417400 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
CITED1-203ENST00000417400 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
CITED1-203ENST00000417400 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
CITED1-203ENST00000417400 CHD1O14646 1710 aa12.93□□□□□ -0.34
CITED1-203ENST00000417400 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
CITED1-203ENST00000417400 EIF4G3O43432 1585 aaKnown RBP12.91□□□□□ -0.34
CITED1-203ENST00000417400 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
CITED1-203ENST00000417400 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
CITED1-203ENST00000417400 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
CITED1-203ENST00000417400 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
CITED1-203ENST00000417400 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
CITED1-203ENST00000417400 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
CITED1-203ENST00000417400 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
CITED1-203ENST00000417400 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
CITED1-203ENST00000417400 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
CITED1-203ENST00000417400 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
CITED1-203ENST00000417400 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
CITED1-203ENST00000417400 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
CITED1-203ENST00000417400 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
CITED1-203ENST00000417400 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
CITED1-203ENST00000417400 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
CITED1-203ENST00000417400 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
CITED1-203ENST00000417400 CUX1P39880 1505 aa12.62□□□□□ -0.39
CITED1-203ENST00000417400 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
CITED1-203ENST00000417400 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
CITED1-203ENST00000417400 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
CITED1-203ENST00000417400 SOGA1O94964 1423 aa12.57□□□□□ -0.4
CITED1-203ENST00000417400 FBLN2P98095 1184 aa12.57□□□□□ -0.4
CITED1-203ENST00000417400 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
CITED1-203ENST00000417400 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
CITED1-203ENST00000417400 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
CITED1-203ENST00000417400 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
CITED1-203ENST00000417400 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.4
CITED1-203ENST00000417400 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
CITED1-203ENST00000417400 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
CITED1-203ENST00000417400 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.41
CITED1-203ENST00000417400 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
CITED1-203ENST00000417400 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
CITED1-203ENST00000417400 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
CITED1-203ENST00000417400 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
CITED1-203ENST00000417400 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
CITED1-203ENST00000417400 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
CITED1-203ENST00000417400 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
CITED1-203ENST00000417400 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
CITED1-203ENST00000417400 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
CITED1-203ENST00000417400 NUP160Q12769 1436 aa12.34□□□□□ -0.43
CITED1-203ENST00000417400 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
CITED1-203ENST00000417400 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms