RNA–Protein interactions for RNA: ENST00000415403.1

RPSAP60-201, Transcript of ribosomal protein SA pseudogene 60, humanhuman

BASIC

Gene RPSAP60, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP60-201ENST00000415403 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
RPSAP60-201ENST00000415403 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
RPSAP60-201ENST00000415403 ABCC9O60706 1549 aa15.26■□□□□ 0.03
RPSAP60-201ENST00000415403 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
RPSAP60-201ENST00000415403 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
RPSAP60-201ENST00000415403 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
RPSAP60-201ENST00000415403 NACADO15069 1562 aa14.56□□□□□ -0.08
RPSAP60-201ENST00000415403 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.1
RPSAP60-201ENST00000415403 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
RPSAP60-201ENST00000415403 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
RPSAP60-201ENST00000415403 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
RPSAP60-201ENST00000415403 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
RPSAP60-201ENST00000415403 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
RPSAP60-201ENST00000415403 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
RPSAP60-201ENST00000415403 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
RPSAP60-201ENST00000415403 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
RPSAP60-201ENST00000415403 SCRIBQ14160 1630 aa13.92□□□□□ -0.18
RPSAP60-201ENST00000415403 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
RPSAP60-201ENST00000415403 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
RPSAP60-201ENST00000415403 CECR2Q9BXF3 1484 aa13.78□□□□□ -0.2
RPSAP60-201ENST00000415403 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
RPSAP60-201ENST00000415403 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
RPSAP60-201ENST00000415403 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
RPSAP60-201ENST00000415403 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
RPSAP60-201ENST00000415403 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
RPSAP60-201ENST00000415403 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
RPSAP60-201ENST00000415403 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
RPSAP60-201ENST00000415403 CUX2O14529 1486 aa13.23□□□□□ -0.29
RPSAP60-201ENST00000415403 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
RPSAP60-201ENST00000415403 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
RPSAP60-201ENST00000415403 DNAJC5Q9H3Z4 198 aa13.19□□□□□ -0.3
RPSAP60-201ENST00000415403 ERCC6Q03468 1493 aa13.15□□□□□ -0.3
RPSAP60-201ENST00000415403 NESP48681 1621 aa13.14□□□□□ -0.31
RPSAP60-201ENST00000415403 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
RPSAP60-201ENST00000415403 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
RPSAP60-201ENST00000415403 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
RPSAP60-201ENST00000415403 WIZO95785 1651 aa13.02□□□□□ -0.33
RPSAP60-201ENST00000415403 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
RPSAP60-201ENST00000415403 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
RPSAP60-201ENST00000415403 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
RPSAP60-201ENST00000415403 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
RPSAP60-201ENST00000415403 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
RPSAP60-201ENST00000415403 WDR62O43379 1518 aa12.9□□□□□ -0.34
RPSAP60-201ENST00000415403 CFTRP13569 1480 aa12.9□□□□□ -0.34
RPSAP60-201ENST00000415403 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
RPSAP60-201ENST00000415403 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
RPSAP60-201ENST00000415403 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
RPSAP60-201ENST00000415403 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
RPSAP60-201ENST00000415403 PRDM2Q13029 1718 aa12.77□□□□□ -0.36
RPSAP60-201ENST00000415403 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
RPSAP60-201ENST00000415403 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
RPSAP60-201ENST00000415403 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
RPSAP60-201ENST00000415403 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
RPSAP60-201ENST00000415403 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
RPSAP60-201ENST00000415403 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
RPSAP60-201ENST00000415403 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
RPSAP60-201ENST00000415403 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
RPSAP60-201ENST00000415403 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
RPSAP60-201ENST00000415403 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
RPSAP60-201ENST00000415403 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
RPSAP60-201ENST00000415403 TRIM41Q8WV44 630 aa12.45□□□□□ -0.42
RPSAP60-201ENST00000415403 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
RPSAP60-201ENST00000415403 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPSAP60-201ENST00000415403 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
RPSAP60-201ENST00000415403 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
RPSAP60-201ENST00000415403 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
RPSAP60-201ENST00000415403 CUX1P39880 1505 aa12.4□□□□□ -0.42
RPSAP60-201ENST00000415403 SOGA1O94964 1423 aa12.39□□□□□ -0.43
RPSAP60-201ENST00000415403 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
RPSAP60-201ENST00000415403 CHD1O14646 1710 aa12.39□□□□□ -0.43
RPSAP60-201ENST00000415403 RAD54L2Q9Y4B4 1467 aa12.39□□□□□ -0.43
RPSAP60-201ENST00000415403 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
RPSAP60-201ENST00000415403 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
RPSAP60-201ENST00000415403 PLPPR3Q6T4P5 718 aa12.32□□□□□ -0.44
RPSAP60-201ENST00000415403 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
RPSAP60-201ENST00000415403 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
RPSAP60-201ENST00000415403 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
RPSAP60-201ENST00000415403 SNAPC4Q5SXM2 1469 aa12.29□□□□□ -0.44
RPSAP60-201ENST00000415403 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
RPSAP60-201ENST00000415403 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
RPSAP60-201ENST00000415403 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
RPSAP60-201ENST00000415403 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
RPSAP60-201ENST00000415403 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
RPSAP60-201ENST00000415403 GAPVD1Q14C86 1478 aa12.26□□□□□ -0.45
RPSAP60-201ENST00000415403 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
RPSAP60-201ENST00000415403 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
RPSAP60-201ENST00000415403 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
RPSAP60-201ENST00000415403 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
RPSAP60-201ENST00000415403 FBLN2P98095 1184 aa12.23□□□□□ -0.45
RPSAP60-201ENST00000415403 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
RPSAP60-201ENST00000415403 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
RPSAP60-201ENST00000415403 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
RPSAP60-201ENST00000415403 NUP160Q12769 1436 aa12.15□□□□□ -0.46
RPSAP60-201ENST00000415403 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
RPSAP60-201ENST00000415403 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
RPSAP60-201ENST00000415403 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
RPSAP60-201ENST00000415403 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
RPSAP60-201ENST00000415403 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
RPSAP60-201ENST00000415403 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
RPSAP60-201ENST00000415403 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms