RNA–Protein interactions for RNA: ENST00000414582.1

MIR548XHG-202, Transcript of MIR548X host gene, humanhuman

TSL 3

Gene MIR548XHG, Length 615 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548XHG-202ENST00000414582 NISCHQ9Y2I1 1504 aa17.02■□□□□ 0.32
MIR548XHG-202ENST00000414582 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
MIR548XHG-202ENST00000414582 ABCC9O60706 1549 aa15.16■□□□□ 0.02
MIR548XHG-202ENST00000414582 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
MIR548XHG-202ENST00000414582 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
MIR548XHG-202ENST00000414582 NACADO15069 1562 aa14.39□□□□□ -0.11
MIR548XHG-202ENST00000414582 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
MIR548XHG-202ENST00000414582 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
MIR548XHG-202ENST00000414582 MYO15BQ96JP2 1530 aa14.22□□□□□ -0.13
MIR548XHG-202ENST00000414582 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
MIR548XHG-202ENST00000414582 CHIC1Q5VXU3 224 aa14.16□□□□□ -0.14
MIR548XHG-202ENST00000414582 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
MIR548XHG-202ENST00000414582 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
MIR548XHG-202ENST00000414582 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
MIR548XHG-202ENST00000414582 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
MIR548XHG-202ENST00000414582 SCRIBQ14160 1630 aa13.94□□□□□ -0.18
MIR548XHG-202ENST00000414582 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
MIR548XHG-202ENST00000414582 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
MIR548XHG-202ENST00000414582 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
MIR548XHG-202ENST00000414582 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
MIR548XHG-202ENST00000414582 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
MIR548XHG-202ENST00000414582 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
MIR548XHG-202ENST00000414582 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
MIR548XHG-202ENST00000414582 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
MIR548XHG-202ENST00000414582 SMARCA2P51531 1590 aa13.22□□□□□ -0.29
MIR548XHG-202ENST00000414582 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
MIR548XHG-202ENST00000414582 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
MIR548XHG-202ENST00000414582 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
MIR548XHG-202ENST00000414582 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
MIR548XHG-202ENST00000414582 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
MIR548XHG-202ENST00000414582 NESP48681 1621 aa13.07□□□□□ -0.32
MIR548XHG-202ENST00000414582 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
MIR548XHG-202ENST00000414582 CUX2O14529 1486 aa13.04□□□□□ -0.32
MIR548XHG-202ENST00000414582 WIZO95785 1651 aa13.01□□□□□ -0.33
MIR548XHG-202ENST00000414582 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
MIR548XHG-202ENST00000414582 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
MIR548XHG-202ENST00000414582 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
MIR548XHG-202ENST00000414582 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
MIR548XHG-202ENST00000414582 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
MIR548XHG-202ENST00000414582 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
MIR548XHG-202ENST00000414582 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
MIR548XHG-202ENST00000414582 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
MIR548XHG-202ENST00000414582 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
MIR548XHG-202ENST00000414582 WDR62O43379 1518 aa12.78□□□□□ -0.36
MIR548XHG-202ENST00000414582 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
MIR548XHG-202ENST00000414582 CFTRP13569 1480 aa12.74□□□□□ -0.37
MIR548XHG-202ENST00000414582 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
MIR548XHG-202ENST00000414582 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
MIR548XHG-202ENST00000414582 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
MIR548XHG-202ENST00000414582 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
MIR548XHG-202ENST00000414582 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
MIR548XHG-202ENST00000414582 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
MIR548XHG-202ENST00000414582 DNMBPQ6XZF7 1577 aa12.49□□□□□ -0.41
MIR548XHG-202ENST00000414582 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
MIR548XHG-202ENST00000414582 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
MIR548XHG-202ENST00000414582 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.42
MIR548XHG-202ENST00000414582 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
MIR548XHG-202ENST00000414582 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
MIR548XHG-202ENST00000414582 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
MIR548XHG-202ENST00000414582 CHD1O14646 1710 aa12.37□□□□□ -0.43
MIR548XHG-202ENST00000414582 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
MIR548XHG-202ENST00000414582 CUX1P39880 1505 aa12.34□□□□□ -0.43
MIR548XHG-202ENST00000414582 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
MIR548XHG-202ENST00000414582 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
MIR548XHG-202ENST00000414582 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
MIR548XHG-202ENST00000414582 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.44
MIR548XHG-202ENST00000414582 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
MIR548XHG-202ENST00000414582 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
MIR548XHG-202ENST00000414582 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
MIR548XHG-202ENST00000414582 SOGA1O94964 1423 aa12.28□□□□□ -0.44
MIR548XHG-202ENST00000414582 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
MIR548XHG-202ENST00000414582 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
MIR548XHG-202ENST00000414582 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
MIR548XHG-202ENST00000414582 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
MIR548XHG-202ENST00000414582 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
MIR548XHG-202ENST00000414582 SENP3Q9H4L4 574 aaPredicted RBP12.24□□□□□ -0.45
MIR548XHG-202ENST00000414582 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
MIR548XHG-202ENST00000414582 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
MIR548XHG-202ENST00000414582 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
MIR548XHG-202ENST00000414582 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
MIR548XHG-202ENST00000414582 CLASP1Q7Z460 1538 aa12.19□□□□□ -0.46
MIR548XHG-202ENST00000414582 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
MIR548XHG-202ENST00000414582 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
MIR548XHG-202ENST00000414582 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
MIR548XHG-202ENST00000414582 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
MIR548XHG-202ENST00000414582 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
MIR548XHG-202ENST00000414582 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
MIR548XHG-202ENST00000414582 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
MIR548XHG-202ENST00000414582 FBLN2P98095 1184 aa12.15□□□□□ -0.46
MIR548XHG-202ENST00000414582 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
MIR548XHG-202ENST00000414582 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
MIR548XHG-202ENST00000414582 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
MIR548XHG-202ENST00000414582 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
MIR548XHG-202ENST00000414582 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
MIR548XHG-202ENST00000414582 GRIN2AQ12879 1464 aa12.05□□□□□ -0.48
MIR548XHG-202ENST00000414582 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
MIR548XHG-202ENST00000414582 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
MIR548XHG-202ENST00000414582 NUP160Q12769 1436 aa12.01□□□□□ -0.49
MIR548XHG-202ENST00000414582 SHROOM2Q13796 1616 aa12□□□□□ -0.49
MIR548XHG-202ENST00000414582 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms